RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GAS8-AS1O95177 125 aa14.52□□□□□ -0.09
COL27A1-208ENST00000494780 BLOC1S1P78537 153 aa14.52□□□□□ -0.09
COL27A1-208ENST00000494780 SS18Q15532 418 aa14.52□□□□□ -0.09
COL27A1-208ENST00000494780 MRPL52Q86TS9 123 aaKnown RBP14.52□□□□□ -0.09
COL27A1-208ENST00000494780 CARD19Q96LW7 228 aa14.52□□□□□ -0.09
COL27A1-208ENST00000494780 TMEM191AQ9H0A3 160 aa14.51□□□□□ -0.09
COL27A1-208ENST00000494780 CDC42SE2Q9NRR3 84 aa14.51□□□□□ -0.09
COL27A1-208ENST00000494780 A0A1B0GUT8 65 aa14.5□□□□□ -0.09
COL27A1-208ENST00000494780 POLR2KP53803 58 aaKnown RBP14.5□□□□□ -0.09
COL27A1-208ENST00000494780 CD164L2Q6UWJ8 174 aa14.5□□□□□ -0.09
COL27A1-208ENST00000494780 LINC00526Q96FQ7 95 aa14.5□□□□□ -0.09
COL27A1-208ENST00000494780 TRBV27A0A0K0K1C4 114 aa14.49□□□□□ -0.09
COL27A1-208ENST00000494780 ZNF561-AS1K7EIQ3 104 aa14.49□□□□□ -0.09
COL27A1-208ENST00000494780 SPINK6Q6UWN8 80 aa14.49□□□□□ -0.09
COL27A1-208ENST00000494780 TNXBP22105 4242 aa14.48□□□□□ -0.09
COL27A1-208ENST00000494780 CEBPGP53567 150 aa14.48□□□□□ -0.09
COL27A1-208ENST00000494780 SYCNQ0VAF6 134 aa14.48□□□□□ -0.09
COL27A1-208ENST00000494780 ZNF664Q8N3J9 261 aa14.48□□□□□ -0.09
COL27A1-208ENST00000494780 TSKUQ8WUA8 353 aa14.48□□□□□ -0.09
COL27A1-208ENST00000494780 C7orf77A4D0Y5 90 aa14.47□□□□□ -0.09
COL27A1-208ENST00000494780 HIGD1CA8MV81 97 aa14.47□□□□□ -0.09
COL27A1-208ENST00000494780 RAB4AP20338 218 aa14.47□□□□□ -0.09
COL27A1-208ENST00000494780 ALKAL2Q6UX46 152 aa14.47□□□□□ -0.09
COL27A1-208ENST00000494780 A0A0J9YXV3 536 aa14.46□□□□□ -0.09
COL27A1-208ENST00000494780 REG3GQ6UW15 175 aa14.45□□□□□ -0.1
COL27A1-208ENST00000494780 LINC01551Q86U37 167 aa14.45□□□□□ -0.1
COL27A1-208ENST00000494780 SMIM7Q9BQ49 75 aa14.45□□□□□ -0.1
COL27A1-208ENST00000494780 CAMPP49913 170 aa14.44□□□□□ -0.1
COL27A1-208ENST00000494780 Q6ZRP5 223 aa14.44□□□□□ -0.1
COL27A1-208ENST00000494780 AMN1Q8IY45 258 aa14.44□□□□□ -0.1
COL27A1-208ENST00000494780 ISOC2Q96AB3 205 aa14.44□□□□□ -0.1
COL27A1-208ENST00000494780 OSTCQ9NRP0 149 aa14.44□□□□□ -0.1
COL27A1-208ENST00000494780 VCYO14598 125 aa14.43□□□□□ -0.1
COL27A1-208ENST00000494780 C1orf196B1AJZ1 125 aa14.42□□□□□ -0.1
COL27A1-208ENST00000494780 MALP21145 153 aa14.42□□□□□ -0.1
COL27A1-208ENST00000494780 FCER1GP30273 86 aa14.42□□□□□ -0.1
COL27A1-208ENST00000494780 PTTG1IPP53801 180 aa14.42□□□□□ -0.1
COL27A1-208ENST00000494780 KRTAP10-8P60410 259 aa14.42□□□□□ -0.1
COL27A1-208ENST00000494780 SRSF9Q13242 221 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL27A1-208ENST00000494780 CSDC2Q9Y534 153 aaKnown RBP14.42□□□□□ -0.1
COL27A1-208ENST00000494780 LOC107984640A0A0U1RRK4 108 aa14.41□□□□□ -0.1
COL27A1-208ENST00000494780 PPP1R17O96001 155 aa14.41□□□□□ -0.1
COL27A1-208ENST00000494780 SMAGPQ0VAQ4 97 aa14.41□□□□□ -0.1
COL27A1-208ENST00000494780 EIF5A2Q9GZV4 153 aaKnown RBP14.41□□□□□ -0.1
COL27A1-208ENST00000494780 IGLV4-69A0A075B6H9 119 aa14.4□□□□□ -0.1
COL27A1-208ENST00000494780 COX7A2LO14548 114 aa14.4□□□□□ -0.1
COL27A1-208ENST00000494780 RIGQ13278 110 aa14.4□□□□□ -0.1
COL27A1-208ENST00000494780 ZNF727A8MUV8 499 aa14.39□□□□□ -0.11
COL27A1-208ENST00000494780 SMKR1H3BMG3 65 aa14.39□□□□□ -0.11
COL27A1-208ENST00000494780 GAGE2BQ13066 116 aa14.39□□□□□ -0.11
COL27A1-208ENST00000494780 AKAP14Q86UN6 197 aa14.39□□□□□ -0.11
COL27A1-208ENST00000494780 UBE2D4Q9Y2X8 147 aa14.39□□□□□ -0.11
COL27A1-208ENST00000494780 SUMO2P61956 95 aaKnown RBP14.38□□□□□ -0.11
COL27A1-208ENST00000494780 NRACQ8N912 160 aa14.38□□□□□ -0.11
COL27A1-208ENST00000494780 NUP35Q8NFH5 326 aa14.38□□□□□ -0.11
COL27A1-208ENST00000494780 KIR2DL4Q99706 377 aa14.38□□□□□ -0.11
COL27A1-208ENST00000494780 LRP2P98164 4655 aa14.38□□□□□ -0.11
COL27A1-208ENST00000494780 ODF1Q14990 250 aa14.37□□□□□ -0.11
COL27A1-208ENST00000494780 V9GYV3 84 aa14.37□□□□□ -0.11
COL27A1-208ENST00000494780 SRP19P09132 144 aaKnown RBP14.36□□□□□ -0.11
COL27A1-208ENST00000494780 C2orf48Q96LS8 159 aa14.36□□□□□ -0.11
COL27A1-208ENST00000494780 CAMK2N2Q96S95 79 aa14.36□□□□□ -0.11
COL27A1-208ENST00000494780 PPP1R2P9O14990 202 aa14.35□□□□□ -0.11
COL27A1-208ENST00000494780 APOMO95445 188 aa14.35□□□□□ -0.11
COL27A1-208ENST00000494780 TRAV13-1A0A0B4J241 112 aa14.34□□□□□ -0.11
COL27A1-208ENST00000494780 A0A1W2PNN7 141 aa14.34□□□□□ -0.11
COL27A1-208ENST00000494780 RNASE13Q5GAN3 156 aaKnown RBP14.34□□□□□ -0.11
COL27A1-208ENST00000494780 TMEM18Q96B42 140 aa14.34□□□□□ -0.11
COL27A1-208ENST00000494780 TIMM21Q9BVV7 248 aa14.34□□□□□ -0.11
COL27A1-208ENST00000494780 NAT8BQ9UHF3 227 aa14.33□□□□□ -0.12
COL27A1-208ENST00000494780 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.32□□□□□ -0.12
COL27A1-208ENST00000494780 Q6ZUT4 128 aa14.32□□□□□ -0.12
COL27A1-208ENST00000494780 C5orf38Q86SI9 138 aa14.32□□□□□ -0.12
COL27A1-208ENST00000494780 MRPL51Q4U2R6 128 aaKnown RBP14.31□□□□□ -0.12
COL27A1-208ENST00000494780 FAM104BQ5XKR9 115 aa14.31□□□□□ -0.12
COL27A1-208ENST00000494780 LINC00862A6NCI5 91 aa14.3□□□□□ -0.12
COL27A1-208ENST00000494780 C9orf116Q5BN46 136 aaPredicted RBP14.3□□□□□ -0.12
COL27A1-208ENST00000494780 C20orf78Q9BR46 151 aa14.3□□□□□ -0.12
COL27A1-208ENST00000494780 RPL18AQ02543 176 aaKnown RBP14.29□□□□□ -0.12
COL27A1-208ENST00000494780 SPAG11BQ08648 103 aa14.29□□□□□ -0.12
COL27A1-208ENST00000494780 TMEM241Q24JQ0 296 aa14.29□□□□□ -0.12
COL27A1-208ENST00000494780 RNF151Q2KHN1 245 aa14.29□□□□□ -0.12
COL27A1-208ENST00000494780 TCAPO15273 167 aa14.28□□□□□ -0.12
COL27A1-208ENST00000494780 RPL32P62910 135 aaKnown RBP14.28□□□□□ -0.12
COL27A1-208ENST00000494780 FAM74A3Q4VXF1 159 aa14.28□□□□□ -0.12
COL27A1-208ENST00000494780 PSORS1C2Q9UIG4 136 aa14.28□□□□□ -0.12
COL27A1-208ENST00000494780 TRBV24-1A0A075B6N3 115 aa14.27□□□□□ -0.13
COL27A1-208ENST00000494780 MT-ND6P03923 174 aa14.27□□□□□ -0.13
COL27A1-208ENST00000494780 RPL23P62829 140 aaKnown RBP14.27□□□□□ -0.13
COL27A1-208ENST00000494780 OR10D4PQ8NGN7 298 aa14.27□□□□□ -0.13
COL27A1-208ENST00000494780 OPRPNQ99935 248 aaPredicted RBP14.26□□□□□ -0.13
COL27A1-208ENST00000494780 hCG_2014768A0A024R1R8 64 aa14.25□□□□□ -0.13
COL27A1-208ENST00000494780 A0A1B0GW15 77 aa14.25□□□□□ -0.13
COL27A1-208ENST00000494780 SMIM27A0A1W2PRY6 76 aa14.25□□□□□ -0.13
COL27A1-208ENST00000494780 F8WDY8 70 aa14.25□□□□□ -0.13
COL27A1-208ENST00000494780 CKS2P33552 79 aa14.25□□□□□ -0.13
COL27A1-208ENST00000494780 ADIRFQ15847 76 aa14.24□□□□□ -0.13
COL27A1-208ENST00000494780 MRPL35Q9NZE8 188 aaKnown RBP14.24□□□□□ -0.13
COL27A1-208ENST00000494780 RPL39P62891 51 aaKnown RBP14.23□□□□□ -0.13
COL27A1-208ENST00000494780 PHF5AQ7RTV0 110 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms