RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
LIME1-208ENST00000493265 IGKV3OR2-268A0A0C4DH90 116 aa11.61□□□□□ -0.55
LIME1-208ENST00000493265 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
LIME1-208ENST00000493265 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
LIME1-208ENST00000493265 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
LIME1-208ENST00000493265 UBE2WQ96B02 151 aa11.61□□□□□ -0.55
LIME1-208ENST00000493265 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
LIME1-208ENST00000493265 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
LIME1-208ENST00000493265 A0A1B0GUV1 79 aa11.6□□□□□ -0.55
LIME1-208ENST00000493265 HSBP1O75506 76 aa11.6□□□□□ -0.55
LIME1-208ENST00000493265 ZNF25P17030 456 aaPredicted RBP11.6□□□□□ -0.55
LIME1-208ENST00000493265 G0S2P27469 103 aa11.6□□□□□ -0.55
LIME1-208ENST00000493265 NDUFA6P56556 154 aa11.6□□□□□ -0.55
LIME1-208ENST00000493265 MRPL52Q86TS9 123 aaKnown RBP11.6□□□□□ -0.55
LIME1-208ENST00000493265 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
LIME1-208ENST00000493265 NUPR1O60356 82 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 CRPP02741 224 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 LINC00310P59036 64 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 Q6ZUT4 128 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
LIME1-208ENST00000493265 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
LIME1-208ENST00000493265 HBDP02042 147 aa11.58□□□□□ -0.56
LIME1-208ENST00000493265 Q6ZR54 194 aa11.58□□□□□ -0.56
LIME1-208ENST00000493265 ZNF664Q8N3J9 261 aa11.58□□□□□ -0.56
LIME1-208ENST00000493265 SCGB3A1Q96QR1 104 aa11.58□□□□□ -0.56
LIME1-208ENST00000493265 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
LIME1-208ENST00000493265 A0A096LNJ9 63 aa11.57□□□□□ -0.56
LIME1-208ENST00000493265 REG3AQ06141 175 aa11.57□□□□□ -0.56
LIME1-208ENST00000493265 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
LIME1-208ENST00000493265 K7EP13 123 aa11.56□□□□□ -0.56
LIME1-208ENST00000493265 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
LIME1-208ENST00000493265 RYR1P21817 5038 aa11.56□□□□□ -0.56
LIME1-208ENST00000493265 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
LIME1-208ENST00000493265 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
LIME1-208ENST00000493265 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
LIME1-208ENST00000493265 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
LIME1-208ENST00000493265 ZC2HC1BQ5TFG8 222 aa11.54□□□□□ -0.56
LIME1-208ENST00000493265 ERASQ7Z444 233 aa11.54□□□□□ -0.56
LIME1-208ENST00000493265 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
LIME1-208ENST00000493265 IGKV2D-24A0A075B6R9 120 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 Q6ZN92 141 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 C6orf223Q8N319 242 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 TMEM141Q96I45 108 aa11.53□□□□□ -0.56
LIME1-208ENST00000493265 FAT2Q9NYQ8 4349 aa11.52□□□□□ -0.56
LIME1-208ENST00000493265 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
LIME1-208ENST00000493265 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
LIME1-208ENST00000493265 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
LIME1-208ENST00000493265 TIMM17AQ99595 171 aa11.52□□□□□ -0.57
LIME1-208ENST00000493265 VCX2Q9H322 139 aa11.52□□□□□ -0.57
LIME1-208ENST00000493265 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
LIME1-208ENST00000493265 DNAH2Q9P225 4427 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 LINC01549A6NIU2 74 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.51□□□□□ -0.57
LIME1-208ENST00000493265 FABP4P15090 132 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 MIAQ16674 131 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 C1orf43Q9BWL3 253 aa11.51□□□□□ -0.57
LIME1-208ENST00000493265 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
LIME1-208ENST00000493265 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
LIME1-208ENST00000493265 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
LIME1-208ENST00000493265 RMI2Q96E14 147 aa11.5□□□□□ -0.57
LIME1-208ENST00000493265 PKHD1P08F94 4074 aa11.5□□□□□ -0.57
LIME1-208ENST00000493265 PSCAO43653 123 aa11.49□□□□□ -0.57
LIME1-208ENST00000493265 S100A6P06703 90 aa11.49□□□□□ -0.57
LIME1-208ENST00000493265 SS18Q15532 418 aa11.49□□□□□ -0.57
LIME1-208ENST00000493265 COA6Q5JTJ3 125 aaKnown RBP11.49□□□□□ -0.57
LIME1-208ENST00000493265 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
LIME1-208ENST00000493265 NFE4Q86UQ8 179 aa11.49□□□□□ -0.57
LIME1-208ENST00000493265 ATP5LO75964 103 aa11.48□□□□□ -0.57
LIME1-208ENST00000493265 LEPROTL1O95214 131 aa11.48□□□□□ -0.57
LIME1-208ENST00000493265 XCL1P47992 114 aa11.48□□□□□ -0.57
LIME1-208ENST00000493265 BAALCQ8WXS3 180 aa11.48□□□□□ -0.57
LIME1-208ENST00000493265 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
LIME1-208ENST00000493265 TMA7Q9Y2S6 64 aaKnown RBP11.48□□□□□ -0.57
LIME1-208ENST00000493265 CCL25O15444 150 aa11.47□□□□□ -0.57
LIME1-208ENST00000493265 NPSP0C0P6 89 aa11.47□□□□□ -0.57
LIME1-208ENST00000493265 CHCHD10Q8WYQ3 142 aaPredicted RBP11.47□□□□□ -0.57
LIME1-208ENST00000493265 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
LIME1-208ENST00000493265 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
LIME1-208ENST00000493265 DYNC1H1Q14204 4646 aaKnown RBP11.47□□□□□ -0.57
LIME1-208ENST00000493265 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 PRSS29PA6NIE9 313 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 H0Y8G0 127 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 PRSS1P07477 247 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 LINC00336Q6ZUF6 198 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 AMELXQ99217 191 aa11.46□□□□□ -0.57
LIME1-208ENST00000493265 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
LIME1-208ENST00000493265 HSPB8Q9UJY1 196 aa11.45□□□□□ -0.58
LIME1-208ENST00000493265 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
LIME1-208ENST00000493265 A0A1B0GVY2 172 aa11.44□□□□□ -0.58
LIME1-208ENST00000493265 RTL8CO15255 209 aa11.44□□□□□ -0.58
LIME1-208ENST00000493265 SNRPEP62304 92 aaKnown RBP11.44□□□□□ -0.58
LIME1-208ENST00000493265 PMVKQ15126 192 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms