RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 WFDC2Q14508 124 aa9.69□□□□□ -0.86
SS18L1-205ENST00000492466 NDUFA5Q16718 116 aa9.69□□□□□ -0.86
SS18L1-205ENST00000492466 DGAT2L7PQ6IED9 249 aa9.69□□□□□ -0.86
SS18L1-205ENST00000492466 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
SS18L1-205ENST00000492466 OR5A1Q8NGJ0 315 aa9.69□□□□□ -0.86
SS18L1-205ENST00000492466 PRR34Q9NV39 138 aa9.69□□□□□ -0.86
SS18L1-205ENST00000492466 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
SS18L1-205ENST00000492466 TMEM18Q96B42 140 aa9.68□□□□□ -0.86
SS18L1-205ENST00000492466 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
SS18L1-205ENST00000492466 C20orf78Q9BR46 151 aa9.68□□□□□ -0.86
SS18L1-205ENST00000492466 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
SS18L1-205ENST00000492466 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
SS18L1-205ENST00000492466 TCAPO15273 167 aa9.67□□□□□ -0.86
SS18L1-205ENST00000492466 NPYP01303 97 aa9.67□□□□□ -0.86
SS18L1-205ENST00000492466 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
SS18L1-205ENST00000492466 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
SS18L1-205ENST00000492466 RHEBQ15382 184 aa9.66□□□□□ -0.86
SS18L1-205ENST00000492466 RPS10P5Q9NQ39 176 aa9.66□□□□□ -0.86
SS18L1-205ENST00000492466 FAM30AQ9NZY2 134 aa9.66□□□□□ -0.86
SS18L1-205ENST00000492466 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
SS18L1-205ENST00000492466 PHOX2AO14813 284 aa9.65□□□□□ -0.86
SS18L1-205ENST00000492466 ESDP10768 282 aa9.65□□□□□ -0.86
SS18L1-205ENST00000492466 RAB5AP20339 215 aa9.65□□□□□ -0.86
SS18L1-205ENST00000492466 MAP1LC3AQ9H492 121 aa9.65□□□□□ -0.86
SS18L1-205ENST00000492466 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
SS18L1-205ENST00000492466 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
SS18L1-205ENST00000492466 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
SS18L1-205ENST00000492466 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
SS18L1-205ENST00000492466 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
SS18L1-205ENST00000492466 APOC3P02656 99 aa9.63□□□□□ -0.87
SS18L1-205ENST00000492466 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
SS18L1-205ENST00000492466 CLRN3Q8NCR9 226 aa9.63□□□□□ -0.87
SS18L1-205ENST00000492466 LAMTOR2Q9Y2Q5 125 aa9.63□□□□□ -0.87
SS18L1-205ENST00000492466 GAGE12HA6NDE8 117 aa9.62□□□□□ -0.87
SS18L1-205ENST00000492466 MRPL52Q86TS9 123 aaKnown RBP9.62□□□□□ -0.87
SS18L1-205ENST00000492466 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
SS18L1-205ENST00000492466 SNAPINO95295 136 aa9.61□□□□□ -0.87
SS18L1-205ENST00000492466 SS18Q15532 418 aa9.61□□□□□ -0.87
SS18L1-205ENST00000492466 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
SS18L1-205ENST00000492466 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
SS18L1-205ENST00000492466 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 XCL1P47992 114 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
SS18L1-205ENST00000492466 C10orf91Q5T1B1 145 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 Q6ZSA8 131 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 SVBPQ8N300 66 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 ZNF664Q8N3J9 261 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 FAT3Q8TDW7 4589 aa9.6□□□□□ -0.87
SS18L1-205ENST00000492466 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
SS18L1-205ENST00000492466 Q6ZUT4 128 aa9.59□□□□□ -0.87
SS18L1-205ENST00000492466 UBE2D4Q9Y2X8 147 aa9.59□□□□□ -0.87
SS18L1-205ENST00000492466 CCL25O15444 150 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 COX19Q49B96 90 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 LINC01620Q4KN68 170 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 CFAP161Q6P656 301 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
SS18L1-205ENST00000492466 LINC00959A0A1B0GUT2 108 aa9.57□□□□□ -0.88
SS18L1-205ENST00000492466 MT-ND6P03923 174 aa9.57□□□□□ -0.88
SS18L1-205ENST00000492466 PRSS1P07477 247 aa9.57□□□□□ -0.88
SS18L1-205ENST00000492466 IFI27P40305 119 aaPredicted RBP9.57□□□□□ -0.88
SS18L1-205ENST00000492466 KRTAP26-1Q6PEX3 210 aa9.57□□□□□ -0.88
SS18L1-205ENST00000492466 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
SS18L1-205ENST00000492466 HMCN2Q8NDA2 5059 aa9.57□□□□□ -0.88
SS18L1-205ENST00000492466 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
SS18L1-205ENST00000492466 TRAV13-1A0A0B4J241 112 aa9.56□□□□□ -0.88
SS18L1-205ENST00000492466 Q8N8P6 123 aa9.56□□□□□ -0.88
SS18L1-205ENST00000492466 GNB1LQ9BYB4 327 aa9.56□□□□□ -0.88
SS18L1-205ENST00000492466 NXT2Q9NPJ8 142 aaKnown RBP9.56□□□□□ -0.88
SS18L1-205ENST00000492466 CSDC2Q9Y534 153 aaKnown RBP9.56□□□□□ -0.88
SS18L1-205ENST00000492466 MALP21145 153 aa9.55□□□□□ -0.88
SS18L1-205ENST00000492466 HIGD2BQ4VC39 106 aa9.55□□□□□ -0.88
SS18L1-205ENST00000492466 ORMDL2Q53FV1 153 aa9.55□□□□□ -0.88
SS18L1-205ENST00000492466 CYSLTR1Q9Y271 337 aa9.55□□□□□ -0.88
SS18L1-205ENST00000492466 IFITM10A6NMD0 228 aa9.54□□□□□ -0.88
SS18L1-205ENST00000492466 C1orf196B1AJZ1 125 aa9.54□□□□□ -0.88
SS18L1-205ENST00000492466 FABP9Q0Z7S8 132 aa9.54□□□□□ -0.88
SS18L1-205ENST00000492466 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
SS18L1-205ENST00000492466 FOXI1Q12951 378 aa9.53□□□□□ -0.88
SS18L1-205ENST00000492466 Q6ZN92 141 aa9.53□□□□□ -0.88
SS18L1-205ENST00000492466 PRSS3P2Q8NHM4 247 aa9.53□□□□□ -0.88
SS18L1-205ENST00000492466 TGIF2-C20orf24A0A0A6YYL0 155 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 K7EMI3 77 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 C2orf66Q6UXQ4 117 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
SS18L1-205ENST00000492466 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
SS18L1-205ENST00000492466 COX7A2LO14548 114 aa9.51□□□□□ -0.89
SS18L1-205ENST00000492466 G0S2P27469 103 aa9.51□□□□□ -0.89
SS18L1-205ENST00000492466 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
SS18L1-205ENST00000492466 OPRPNQ99935 248 aaPredicted RBP9.51□□□□□ -0.89
SS18L1-205ENST00000492466 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
SS18L1-205ENST00000492466 TRAPPC1Q9Y5R8 145 aa9.51□□□□□ -0.89
SS18L1-205ENST00000492466 KRTAP10-4P60372 401 aaPredicted RBP9.5□□□□□ -0.89
SS18L1-205ENST00000492466 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
SS18L1-205ENST00000492466 TEX43Q6ZNM6 134 aa9.5□□□□□ -0.89
SS18L1-205ENST00000492466 FA2HQ7L5A8 372 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms