RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 KIF25-AS1Q9Y6Z4 181 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 A8MTW9 85 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 TSHBP01222 138 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 X6R8D5 127 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 DEFB4AO15263 64 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 LINC00315P59091 139 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 CKS1BP61024 79 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 TMEM170BQ5T4T1 132 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 TEN1Q86WV5 123 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 SLC25A29Q8N8R3 303 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 PPDPFLQ8WWR9 84 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
BRCA1-219ENST00000491747 KLLNB2CW77 178 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 F5H697 171 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 IGHV3-30P01768 117 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 IGHV3-30-5P0DP03 117 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 EMP1P54849 157 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 SUMO4Q6EEV6 95 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 NFE4Q86UQ8 179 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 C10orf126Q8N4M7 172 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 RBMY1A1P0DJD3 496 aaKnown RBP6.73□□□□□ -1.33
BRCA1-219ENST00000491747 RBMY1CP0DJD4 496 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
BRCA1-219ENST00000491747 ZNF876PQ49A33 203 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 Q8NAQ8 132 aa6.73□□□□□ -1.33
BRCA1-219ENST00000491747 KMT2CQ8NEZ4 4911 aaKnown RBP6.72□□□□□ -1.33
BRCA1-219ENST00000491747 A8MWV9 139 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 CFC1P0CG37 223 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 LGALS3P17931 250 aaKnown RBP6.72□□□□□ -1.33
BRCA1-219ENST00000491747 RPL39P62891 51 aaKnown RBP6.72□□□□□ -1.33
BRCA1-219ENST00000491747 CDIP1Q9H305 208 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 PRO1854Q9UHT4 67 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 IGHV4-28A0A0C4DH34 117 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 J3QQQ9 107 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 TCL1BO95988 128 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 SPINK8P0C7L1 97 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 SCGB1C2P0DMR2 95 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 CRYBA4P53673 196 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 MUC4Q99102 2169 aa6.72□□□□□ -1.33
BRCA1-219ENST00000491747 A0A087WWL8 130 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 C1orf158Q8N1D5 194 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 TENM2Q9NT68 2774 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 SPINK13Q1W4C9 94 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 Q6ZUT4 128 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 ZNRF2Q8NHG8 242 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 PTH2Q96A98 100 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 C11orf68Q9H3H3 251 aaKnown RBP6.71□□□□□ -1.34
BRCA1-219ENST00000491747 JPT2Q9H910 190 aa6.71□□□□□ -1.34
BRCA1-219ENST00000491747 RHOHQ15669 191 aa6.7□□□□□ -1.34
BRCA1-219ENST00000491747 FAM74A4Q5TZK3 123 aa6.7□□□□□ -1.34
BRCA1-219ENST00000491747 DYNC2H1Q8NCM8 4307 aaKnown RBP6.7□□□□□ -1.34
BRCA1-219ENST00000491747 TRAV12-2A0A075B6T6 113 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 IGHV3OR16-12A0A075B7B8 117 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 TMEM262E9PQX1 116 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 PRM2P04554 102 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 MIFP14174 115 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 AMELXQ99217 191 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 GEMIN7Q9H840 131 aaKnown RBP6.69□□□□□ -1.34
BRCA1-219ENST00000491747 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 NANOS2P60321 138 aaKnown RBP6.69□□□□□ -1.34
BRCA1-219ENST00000491747 ZNF56Q15929 161 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
BRCA1-219ENST00000491747 M0QXV9 152 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 LEPROTO15243 131 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 MT-ATP8P03928 68 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 XGP55808 180 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 SVIPQ8NHG7 77 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 ODF3Q96PU9 254 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 LYSTQ99698 3801 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 A0A0B4J2C4 111 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 TMEM223A0PJW6 202 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 A4D1N5 150 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 ANKRD29Q8N6D5 301 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 C9orf85Q96MD7 179 aa6.68□□□□□ -1.34
BRCA1-219ENST00000491747 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-219ENST00000491747 IGHV3-16A0A0C4DH30 117 aa6.67□□□□□ -1.34
BRCA1-219ENST00000491747 M0QY20 66 aa6.67□□□□□ -1.34
BRCA1-219ENST00000491747 SLC25A20O43772 301 aa6.67□□□□□ -1.34
BRCA1-219ENST00000491747 C11orf45Q8TAV5 145 aa6.67□□□□□ -1.34
BRCA1-219ENST00000491747 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
BRCA1-219ENST00000491747 MDFICQ9P1T7 246 aa6.67□□□□□ -1.34
BRCA1-219ENST00000491747 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
BRCA1-219ENST00000491747 C9JAW5 83 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 RHODO00212 210 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 IGHV3-33P01772 117 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 P0DMU3 169 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 FAM231AP0DMU4 169 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 FAM231CP0DMU5 169 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 C20orf203Q8NBC4 194 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 RYR3Q15413 4870 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms