RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	MRPL52	Q86TS9	123 aa	Known RBP	12.45	□□□□□ -0.42
SRM-206	ENST00000490101	OR10D4P	Q8NGN7	298 aa		12.45	□□□□□ -0.42
SRM-206	ENST00000490101	TIMM17A	Q99595	171 aa		12.45	□□□□□ -0.42
SRM-206	ENST00000490101	SPANXA1	Q9NS26	97 aa		12.45	□□□□□ -0.42
SRM-206	ENST00000490101	DYNC1H1	Q14204	4646 aa	Known RBP	12.44	□□□□□ -0.42
SRM-206	ENST00000490101	DNAH11	Q96DT5	4516 aa		12.44	□□□□□ -0.42
SRM-206	ENST00000490101	NPS	P0C0P6	89 aa		12.44	□□□□□ -0.42
SRM-206	ENST00000490101	SMAGP	Q0VAQ4	97 aa		12.44	□□□□□ -0.42
SRM-206	ENST00000490101	IFI27L1	Q96BM0	104 aa		12.44	□□□□□ -0.42
SRM-206	ENST00000490101	TMEM141	Q96I45	108 aa		12.44	□□□□□ -0.42
SRM-206	ENST00000490101	UBE2D4	Q9Y2X8	147 aa		12.44	□□□□□ -0.42
SRM-206	ENST00000490101	PRSS29P	A6NIE9	313 aa		12.43	□□□□□ -0.42
SRM-206	ENST00000490101	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.43	□□□□□ -0.42
SRM-206	ENST00000490101	ESRG	Q1W209	222 aa		12.43	□□□□□ -0.42
SRM-206	ENST00000490101	CHCHD5	Q9BSY4	110 aa		12.43	□□□□□ -0.42
SRM-206	ENST00000490101		A0A1B0GVY2	172 aa		12.42	□□□□□ -0.42
SRM-206	ENST00000490101	UBE2L6	O14933	153 aa		12.42	□□□□□ -0.42
SRM-206	ENST00000490101	RTL8C	O15255	209 aa		12.42	□□□□□ -0.42
SRM-206	ENST00000490101	C3orf79	P0CE67	100 aa		12.42	□□□□□ -0.42
SRM-206	ENST00000490101	FGF6	P10767	208 aa		12.42	□□□□□ -0.42
SRM-206	ENST00000490101	MAP1LC3C	Q9BXW4	147 aa		12.42	□□□□□ -0.42
SRM-206	ENST00000490101	CSDC2	Q9Y534	153 aa	Known RBP	12.42	□□□□□ -0.42
SRM-206	ENST00000490101	RYR1	P21817	5038 aa		12.41	□□□□□ -0.42
SRM-206	ENST00000490101	GAGE6	Q13070	117 aa		12.41	□□□□□ -0.42
SRM-206	ENST00000490101	ZNF25	P17030	456 aa	Predicted RBP	12.4	□□□□□ -0.42
SRM-206	ENST00000490101	KRTDAP	P60985	99 aa		12.4	□□□□□ -0.42
SRM-206	ENST00000490101	PKIA	P61925	76 aa		12.4	□□□□□ -0.42
SRM-206	ENST00000490101	MRPS36	P82909	103 aa	Known RBP	12.4	□□□□□ -0.42
SRM-206	ENST00000490101	SPATA12	Q7Z6I5	190 aa		12.4	□□□□□ -0.42
SRM-206	ENST00000490101	FAM104A	Q969W3	186 aa		12.4	□□□□□ -0.42
SRM-206	ENST00000490101	IGLV4-3	A0A075B6K6	122 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101	TRAV8-6	A0A0B4J262	113 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101	SYS1-DBNDD2	H3BUS1	97 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101	PAPPA-AS1	Q5QFB9	102 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101	AMMECR1L	Q6DCA0	310 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101	DGAT2L7P	Q6IED9	249 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101		Q6ZN92	141 aa		12.39	□□□□□ -0.43
SRM-206	ENST00000490101		A0A1B0GUV1	79 aa		12.38	□□□□□ -0.43
SRM-206	ENST00000490101	PRSS1	P07477	247 aa		12.38	□□□□□ -0.43
SRM-206	ENST00000490101	AKR1D1	P51857	326 aa		12.38	□□□□□ -0.43
SRM-206	ENST00000490101	PET117	Q6UWS5	81 aa		12.38	□□□□□ -0.43
SRM-206	ENST00000490101	BAALC	Q8WXS3	180 aa		12.38	□□□□□ -0.43
SRM-206	ENST00000490101	TMEM101	Q96IK0	257 aa		12.38	□□□□□ -0.43
SRM-206	ENST00000490101	OR5A1	Q8NGJ0	315 aa		12.37	□□□□□ -0.43
SRM-206	ENST00000490101	OPRPN	Q99935	248 aa	Predicted RBP	12.37	□□□□□ -0.43
SRM-206	ENST00000490101	TRAV12-1	A0A0B4J245	112 aa		12.36	□□□□□ -0.43
SRM-206	ENST00000490101	TMEM262	E9PQX1	116 aa		12.36	□□□□□ -0.43
SRM-206	ENST00000490101	CCL18	P55774	89 aa		12.36	□□□□□ -0.43
SRM-206	ENST00000490101	RBX1	P62877	108 aa		12.36	□□□□□ -0.43
SRM-206	ENST00000490101	AMELX	Q99217	191 aa		12.36	□□□□□ -0.43
SRM-206	ENST00000490101	CDC42SE2	Q9NRR3	84 aa		12.36	□□□□□ -0.43
SRM-206	ENST00000490101	MRPS16	Q9Y3D3	137 aa	Known RBP	12.36	□□□□□ -0.43
SRM-206	ENST00000490101	PMVK	Q15126	192 aa		12.35	□□□□□ -0.43
SRM-206	ENST00000490101		Q6ZUT4	128 aa		12.35	□□□□□ -0.43
SRM-206	ENST00000490101	VCX2	Q9H322	139 aa		12.35	□□□□□ -0.43
SRM-206	ENST00000490101	LINC00588	Q9Y4M8	146 aa		12.35	□□□□□ -0.43
SRM-206	ENST00000490101	IGLV4-60	A0A075B6I1	120 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101	JOSD1	Q15040	202 aa	Predicted RBP	12.34	□□□□□ -0.43
SRM-206	ENST00000490101	MPV17L2	Q567V2	206 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101	LINC01545	Q5VT33	79 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101		Q6ZR54	194 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101	ZNF664	Q8N3J9	261 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101		Q8N976	141 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101	CST9L	Q9H4G1	147 aa		12.34	□□□□□ -0.43
SRM-206	ENST00000490101		A0A087WX48	190 aa		12.33	□□□□□ -0.44
SRM-206	ENST00000490101		H0Y8G0	127 aa		12.33	□□□□□ -0.44
SRM-206	ENST00000490101	ODF1	Q14990	250 aa		12.33	□□□□□ -0.44
SRM-206	ENST00000490101	WFDC10B	Q8IUB3	73 aa		12.33	□□□□□ -0.44
SRM-206	ENST00000490101	C20orf202	A1L168	122 aa		12.32	□□□□□ -0.44
SRM-206	ENST00000490101	ZC2HC1B	Q5TFG8	222 aa		12.32	□□□□□ -0.44
SRM-206	ENST00000490101	TEX43	Q6ZNM6	134 aa		12.32	□□□□□ -0.44
SRM-206	ENST00000490101	UPK3B	Q9BT76	320 aa		12.32	□□□□□ -0.44
SRM-206	ENST00000490101	PYY3	Q5JQD4	70 aa		12.31	□□□□□ -0.44
SRM-206	ENST00000490101	ABCA13	Q86UQ4	5058 aa		12.31	□□□□□ -0.44
SRM-206	ENST00000490101	SCGB1D1	O95968	90 aa		12.3	□□□□□ -0.44
SRM-206	ENST00000490101	RNASE13	Q5GAN3	156 aa	Known RBP	12.3	□□□□□ -0.44
SRM-206	ENST00000490101	C1orf134	Q5TEV5	83 aa		12.3	□□□□□ -0.44
SRM-206	ENST00000490101	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.3	□□□□□ -0.44
SRM-206	ENST00000490101	DNAH10OS	P0CZ25	163 aa		12.29	□□□□□ -0.44
SRM-206	ENST00000490101	LINC01556	Q5JQF7	62 aa		12.29	□□□□□ -0.44
SRM-206	ENST00000490101		Q8N3U1	123 aa		12.29	□□□□□ -0.44
SRM-206	ENST00000490101	C2orf88	Q9BSF0	95 aa		12.29	□□□□□ -0.44
SRM-206	ENST00000490101	MRPL35	Q9NZE8	188 aa	Known RBP	12.29	□□□□□ -0.44
SRM-206	ENST00000490101		F8VRH5	84 aa		12.28	□□□□□ -0.44
SRM-206	ENST00000490101	PMCHL2	Q9BQD1	86 aa		12.28	□□□□□ -0.44
SRM-206	ENST00000490101	SIVA1	O15304	175 aa		12.27	□□□□□ -0.45
SRM-206	ENST00000490101	ANG	P03950	147 aa	Known RBP	12.27	□□□□□ -0.45
SRM-206	ENST00000490101	UBE2D1	P51668	147 aa		12.27	□□□□□ -0.45
SRM-206	ENST00000490101	IGLV4-69	A0A075B6H9	119 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	DPM2	O94777	84 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	IGHV3-30	P01768	117 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	IGHV3-33	P01772	117 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	IGHV3-30-3	P0DP02	117 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	IGHV3-30-5	P0DP03	117 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	FAM19A3	Q7Z5A8	133 aa		12.26	□□□□□ -0.45
SRM-206	ENST00000490101	SMIM6	P0DI80	62 aa		12.25	□□□□□ -0.45
SRM-206	ENST00000490101	PLN	P26678	52 aa		12.25	□□□□□ -0.45
SRM-206	ENST00000490101	NFE4	Q86UQ8	179 aa		12.25	□□□□□ -0.45
SRM-206	ENST00000490101	LINC00269	Q8N2A0	174 aa		12.25	□□□□□ -0.45
SRM-206	ENST00000490101	PRR34	Q9NV39	138 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms