RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LINC01546A6NGU7 62 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 OOSP1A8MZH6 123 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 D6R8Y8 96 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 H3BSH0 61 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 TIMM17BO60830 172 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 MRPL33O75394 65 aaKnown RBP1.32□□□□□ -2.2
HMGN1-218ENST00000490032 TCL1BO95988 128 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 LTAP01374 205 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 DEFA4P12838 97 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 LOXP28300 417 aaPredicted RBP1.32□□□□□ -2.2
HMGN1-218ENST00000490032 UBE2D1P51668 147 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF137PP52743 207 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 Q6JHZ5 121 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 HRCT1Q6UXD1 115 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 CLEC19AQ6UXS0 136 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 ATP11AUNQ6ZP68 121 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 Q6ZS52 159 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 LINC00336Q6ZUF6 198 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 PRNTQ86SH4 94 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 MUSTN1Q8IVN3 82 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 ZCCHC24Q8N2G6 241 aaKnown RBP1.32□□□□□ -2.2
HMGN1-218ENST00000490032 TOMM6Q96B49 74 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 LIMD2Q9BT23 127 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 SHANK2-AS3Q9BTD1 123 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 CYP4F30PQ9H0H9 118 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 TMEM14CQ9P0S9 112 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 CHD7Q9P2D1 2997 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 HHLA3Q9XRX5 114 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 LENEPQ9Y5L5 61 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 U3KQK5 164 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 DCHS1Q96JQ0 3298 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 ZFHX4Q86UP3 3567 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 HEATR5BQ9P2D3 2071 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 SVILO95425 2214 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 TRANK1O15050 2925 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 GCN1Q92616 2671 aaKnown RBP1.31□□□□□ -2.2
HMGN1-218ENST00000490032 PTPRBP23467 1997 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV8-3A0A0A6YYJ7 113 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 TRBV7-1A0A0A6YYK4 115 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 IGHV1OR15-9A0A0B4J2B8 117 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 A0A0J9YX75 114 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 C11orf86A6NJI1 115 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 H0YGG7 62 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 H7C2G1 150 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 J3QT63 122 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 M0R381 172 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 CCL21O00585 134 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 IGHV3-33P01772 117 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 PRB1P04280 392 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 NPPCP23582 126 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 FXYD2P54710 66 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 DSCR4P56555 118 aaPredicted RBP1.31□□□□□ -2.2
HMGN1-218ENST00000490032 BLCAPP62952 87 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.31□□□□□ -2.2
HMGN1-218ENST00000490032 FAM74A4Q5TZK3 123 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 FAM222AQ5U5X8 452 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 LYZL1Q6UWQ5 148 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 Q6ZRU5 148 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 LYPD6Q86Y78 171 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 TMEM86BQ8N661 226 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 LY6G5BQ8NDX9 201 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 DEFB124Q8NES8 71 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 SPACA5Q96QH8 159 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 DSCR8Q96T75 97 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 AMELYQ99218 206 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 NAA38Q9BRA0 125 aaKnown RBP1.31□□□□□ -2.2
HMGN1-218ENST00000490032 TM2D3Q9BRN9 247 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 SMIM2Q9BVW6 85 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 ORMDL1Q9P0S3 153 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 PHLDA3Q9Y5J5 127 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 ICOSQ9Y6W8 199 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 MDC1Q14676 2089 aaKnown RBP1.31□□□□□ -2.2
HMGN1-218ENST00000490032 MYO18BQ8IUG5 2567 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 USP34Q70CQ2 3546 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 REV3LO60673 3130 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 CPAMD8Q8IZJ3 1885 aa1.31□□□□□ -2.2
HMGN1-218ENST00000490032 XIRP2A4UGR9 3374 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 MYO9AB2RTY4 2548 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 HECTD1Q9ULT8 2610 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 CFAP47Q6ZTR5 3102 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 ASXL3Q9C0F0 2248 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 IGKV1D-42A0A075B6H8 117 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 TRBV7-3A0A075B6L6 115 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 IGHV1-45A0A0A0MS14 117 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV21A0A0B4J279 112 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 TEX49A0A1B0GTD5 131 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 C19orf71A6NCJ1 209 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 COX7A2LO14548 114 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 HCRTO43612 131 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 TRBV12-3P01733 135 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 CCKP06307 115 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 SAA1P0DJI8 122 aaPredicted RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 FUSP35637 526 aaKnown RBP eCLIP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 XCL1P47992 114 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF80P51504 273 aaPredicted RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 FXYD7P58549 80 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 PRCDQ00LT1 54 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 TFF3Q07654 80 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms