RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 GAS8-AS1O95177 125 aa16.29■□□□□ 0.2
RNF220-216ENST00000488865 PRR3P79522 188 aaKnown RBP16.29■□□□□ 0.2
RNF220-216ENST00000488865 TMEM242Q9NWH2 141 aa16.29■□□□□ 0.2
RNF220-216ENST00000488865 POLR2KP53803 58 aaKnown RBP16.28■□□□□ 0.2
RNF220-216ENST00000488865 SS18Q15532 418 aa16.28■□□□□ 0.2
RNF220-216ENST00000488865 ALKAL2Q6UX46 152 aa16.28■□□□□ 0.2
RNF220-216ENST00000488865 MRPL52Q86TS9 123 aaKnown RBP16.28■□□□□ 0.2
RNF220-216ENST00000488865 TSKUQ8WUA8 353 aa16.28■□□□□ 0.2
RNF220-216ENST00000488865 TNXBP22105 4242 aa16.27■□□□□ 0.2
RNF220-216ENST00000488865 TRBV27A0A0K0K1C4 114 aa16.27■□□□□ 0.2
RNF220-216ENST00000488865 HIGD1CA8MV81 97 aa16.27■□□□□ 0.2
RNF220-216ENST00000488865 CEBPGP53567 150 aa16.27■□□□□ 0.2
RNF220-216ENST00000488865 CDC42SE2Q9NRR3 84 aa16.27■□□□□ 0.2
RNF220-216ENST00000488865 CD164L2Q6UWJ8 174 aa16.26■□□□□ 0.19
RNF220-216ENST00000488865 CARD19Q96LW7 228 aa16.26■□□□□ 0.19
RNF220-216ENST00000488865 RAB4AP20338 218 aa16.25■□□□□ 0.19
RNF220-216ENST00000488865 LINC01551Q86U37 167 aa16.25■□□□□ 0.19
RNF220-216ENST00000488865 LINC01600Q96MT4 127 aa16.25■□□□□ 0.19
RNF220-216ENST00000488865 SMIM7Q9BQ49 75 aa16.25■□□□□ 0.19
RNF220-216ENST00000488865 ZNF664Q8N3J9 261 aa16.24■□□□□ 0.19
RNF220-216ENST00000488865 LINC00526Q96FQ7 95 aa16.24■□□□□ 0.19
RNF220-216ENST00000488865 C7orf77A4D0Y5 90 aa16.23■□□□□ 0.19
RNF220-216ENST00000488865 OSTCQ9NRP0 149 aa16.23■□□□□ 0.19
RNF220-216ENST00000488865 ZNF561-AS1K7EIQ3 104 aa16.22■□□□□ 0.19
RNF220-216ENST00000488865 AKAP14Q86UN6 197 aa16.22■□□□□ 0.19
RNF220-216ENST00000488865 EIF5A2Q9GZV4 153 aaKnown RBP16.22■□□□□ 0.19
RNF220-216ENST00000488865 SYCNQ0VAF6 134 aa16.21■□□□□ 0.19
RNF220-216ENST00000488865 AMN1Q8IY45 258 aa16.21■□□□□ 0.19
RNF220-216ENST00000488865 VCYO14598 125 aa16.2■□□□□ 0.18
RNF220-216ENST00000488865 ZNF727A8MUV8 499 aa16.19■□□□□ 0.18
RNF220-216ENST00000488865 CSDC2Q9Y534 153 aaKnown RBP16.19■□□□□ 0.18
RNF220-216ENST00000488865 PPP1R17O96001 155 aa16.18■□□□□ 0.18
RNF220-216ENST00000488865 SMAGPQ0VAQ4 97 aa16.18■□□□□ 0.18
RNF220-216ENST00000488865 RIGQ13278 110 aa16.18■□□□□ 0.18
RNF220-216ENST00000488865 SPINK6Q6UWN8 80 aa16.18■□□□□ 0.18
RNF220-216ENST00000488865 C1orf196B1AJZ1 125 aa16.17■□□□□ 0.18
RNF220-216ENST00000488865 FCER1GP30273 86 aa16.17■□□□□ 0.18
RNF220-216ENST00000488865 CAMPP49913 170 aa16.17■□□□□ 0.18
RNF220-216ENST00000488865 ISOC2Q96AB3 205 aa16.17■□□□□ 0.18
RNF220-216ENST00000488865 V9GYV3 84 aa16.16■□□□□ 0.18
RNF220-216ENST00000488865 SRP19P09132 144 aaKnown RBP16.15■□□□□ 0.18
RNF220-216ENST00000488865 MALP21145 153 aa16.15■□□□□ 0.18
RNF220-216ENST00000488865 PTTG1IPP53801 180 aa16.15■□□□□ 0.18
RNF220-216ENST00000488865 SUMO2P61956 95 aaKnown RBP16.15■□□□□ 0.18
RNF220-216ENST00000488865 Q6ZRP5 223 aa16.15■□□□□ 0.18
RNF220-216ENST00000488865 NUP35Q8NFH5 326 aa16.15■□□□□ 0.18
RNF220-216ENST00000488865 A0A0J9YXV3 536 aa16.14■□□□□ 0.17
RNF220-216ENST00000488865 SMKR1H3BMG3 65 aa16.14■□□□□ 0.17
RNF220-216ENST00000488865 COX7A2LO14548 114 aa16.14■□□□□ 0.17
RNF220-216ENST00000488865 REG3GQ6UW15 175 aa16.14■□□□□ 0.17
RNF220-216ENST00000488865 NRACQ8N912 160 aa16.14■□□□□ 0.17
RNF220-216ENST00000488865 UBE2D4Q9Y2X8 147 aa16.14■□□□□ 0.17
RNF220-216ENST00000488865 IGLV4-69A0A075B6H9 119 aa16.13■□□□□ 0.17
RNF220-216ENST00000488865 LOC107984640A0A0U1RRK4 108 aa16.13■□□□□ 0.17
RNF220-216ENST00000488865 SRSF9Q13242 221 aaKnown RBP eCLIP16.13■□□□□ 0.17
RNF220-216ENST00000488865 KIR2DL4Q99706 377 aa16.13■□□□□ 0.17
RNF220-216ENST00000488865 LRP2P98164 4655 aa16.13■□□□□ 0.17
RNF220-216ENST00000488865 PPP1R2P9O14990 202 aa16.11■□□□□ 0.17
RNF220-216ENST00000488865 KRTAP10-8P60410 259 aa16.1■□□□□ 0.17
RNF220-216ENST00000488865 GAGE2BQ13066 116 aa16.1■□□□□ 0.17
RNF220-216ENST00000488865 NAT8BQ9UHF3 227 aa16.1■□□□□ 0.17
RNF220-216ENST00000488865 C2orf48Q96LS8 159 aa16.09■□□□□ 0.17
RNF220-216ENST00000488865 TIMM21Q9BVV7 248 aa16.09■□□□□ 0.17
RNF220-216ENST00000488865 TRAV13-1A0A0B4J241 112 aa16.08■□□□□ 0.16
RNF220-216ENST00000488865 TMEM241Q24JQ0 296 aa16.08■□□□□ 0.16
RNF220-216ENST00000488865 FAM74A3Q4VXF1 159 aa16.08■□□□□ 0.16
RNF220-216ENST00000488865 RNASE13Q5GAN3 156 aaKnown RBP16.08■□□□□ 0.16
RNF220-216ENST00000488865 FAM104BQ5XKR9 115 aa16.08■□□□□ 0.16
RNF220-216ENST00000488865 TMEM18Q96B42 140 aa16.08■□□□□ 0.16
RNF220-216ENST00000488865 CAMK2N2Q96S95 79 aa16.08■□□□□ 0.16
RNF220-216ENST00000488865 APOMO95445 188 aa16.07■□□□□ 0.16
RNF220-216ENST00000488865 hCG_2014768A0A024R1R8 64 aa16.06■□□□□ 0.16
RNF220-216ENST00000488865 LINC00862A6NCI5 91 aa16.06■□□□□ 0.16
RNF220-216ENST00000488865 MRPL51Q4U2R6 128 aaKnown RBP16.06■□□□□ 0.16
RNF220-216ENST00000488865 C20orf78Q9BR46 151 aa16.06■□□□□ 0.16
RNF220-216ENST00000488865 RPL23P62829 140 aaKnown RBP16.05■□□□□ 0.16
RNF220-216ENST00000488865 Q6ZUT4 128 aa16.05■□□□□ 0.16
RNF220-216ENST00000488865 C5orf38Q86SI9 138 aa16.05■□□□□ 0.16
RNF220-216ENST00000488865 TRBV24-1A0A075B6N3 115 aa16.04■□□□□ 0.16
RNF220-216ENST00000488865 A0A1W2PNN7 141 aa16.04■□□□□ 0.16
RNF220-216ENST00000488865 RPL32P62910 135 aaKnown RBP16.04■□□□□ 0.16
RNF220-216ENST00000488865 SMIM27A0A1W2PRY6 76 aa16.03■□□□□ 0.16
RNF220-216ENST00000488865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.03■□□□□ 0.16
RNF220-216ENST00000488865 TCAPO15273 167 aa16.03■□□□□ 0.16
RNF220-216ENST00000488865 ODF1Q14990 250 aa16.03■□□□□ 0.16
RNF220-216ENST00000488865 A0A1B0GW15 77 aa16.02■□□□□ 0.16
RNF220-216ENST00000488865 ADIRFQ15847 76 aa16.01■□□□□ 0.15
RNF220-216ENST00000488865 RNF151Q2KHN1 245 aa16.01■□□□□ 0.15
RNF220-216ENST00000488865 CKS2P33552 79 aa16■□□□□ 0.15
RNF220-216ENST00000488865 SPAG11BQ08648 103 aa16■□□□□ 0.15
RNF220-216ENST00000488865 C9orf116Q5BN46 136 aaPredicted RBP16■□□□□ 0.15
RNF220-216ENST00000488865 OR10D4PQ8NGN7 298 aa16■□□□□ 0.15
RNF220-216ENST00000488865 NAT8Q9UHE5 227 aa16■□□□□ 0.15
RNF220-216ENST00000488865 RPL18AQ02543 176 aaKnown RBP15.99■□□□□ 0.15
RNF220-216ENST00000488865 F8WDY8 70 aa15.98■□□□□ 0.15
RNF220-216ENST00000488865 TNFRSF6BO95407 300 aa15.98■□□□□ 0.15
RNF220-216ENST00000488865 PSORS1C2Q9UIG4 136 aa15.98■□□□□ 0.15
RNF220-216ENST00000488865 RPL39P62891 51 aaKnown RBP15.97■□□□□ 0.15
RNF220-216ENST00000488865 FAM104AQ969W3 186 aa15.97■□□□□ 0.15
RNF220-216ENST00000488865 OPRPNQ99935 248 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms