RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
HDLBP-242ENST00000488013 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
HDLBP-242ENST00000488013 CCL25O15444 150 aa7.56□□□□□ -1.2
HDLBP-242ENST00000488013 LINC00310P59036 64 aa7.56□□□□□ -1.2
HDLBP-242ENST00000488013 PDZD11Q5EBL8 140 aa7.56□□□□□ -1.2
HDLBP-242ENST00000488013 VCX2Q9H322 139 aa7.56□□□□□ -1.2
HDLBP-242ENST00000488013 Q9H8V8 135 aa7.56□□□□□ -1.2
HDLBP-242ENST00000488013 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
HDLBP-242ENST00000488013 AKR1D1P51857 326 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
HDLBP-242ENST00000488013 RBX1P62877 108 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 RPL39P62891 51 aaKnown RBP7.55□□□□□ -1.2
HDLBP-242ENST00000488013 TTC32Q5I0X7 151 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 HIST3H2BBQ8N257 126 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 FAM19A2Q8N3H0 131 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 MAP1LC3CQ9BXW4 147 aa7.55□□□□□ -1.2
HDLBP-242ENST00000488013 A0A096LNJ9 63 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 NUPR1O60356 82 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 PMCHL1Q16048 86 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 TEX43Q6ZNM6 134 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 WFDC10BQ8IUB3 73 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 ZNF664Q8N3J9 261 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
HDLBP-242ENST00000488013 DYNC2H1Q8NCM8 4307 aaKnown RBP7.54□□□□□ -1.2
HDLBP-242ENST00000488013 PRSS1P07477 247 aa7.53□□□□□ -1.2
HDLBP-242ENST00000488013 SEC11AP67812 179 aa7.53□□□□□ -1.2
HDLBP-242ENST00000488013 MPV17L2Q567V2 206 aa7.53□□□□□ -1.2
HDLBP-242ENST00000488013 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
HDLBP-242ENST00000488013 IGLV4-3A0A075B6K6 122 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 TRAV8-3A0A0A6YYJ7 113 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 CRPP02741 224 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
HDLBP-242ENST00000488013 FABP4P15090 132 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 PMVKQ15126 192 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 SPATA12Q7Z6I5 190 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.21
HDLBP-242ENST00000488013 TRAV12-1A0A0B4J245 112 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 C20orf202A1L168 122 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 MIAQ16674 131 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 Q8N976 141 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 RMI2Q96E14 147 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 AMELXQ99217 191 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 PRR34Q9NV39 138 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
HDLBP-242ENST00000488013 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IGLV4-60A0A075B6I1 120 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IGHV3-30P01768 117 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IGHV3-33P01772 117 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IGHV3-30-5P0DP03 117 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 REG3AQ06141 175 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 SS18Q15532 418 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 PET117Q6UWS5 81 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 BAALCQ8WXS3 180 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
HDLBP-242ENST00000488013 IFITM10A6NMD0 228 aa7.49□□□□□ -1.21
HDLBP-242ENST00000488013 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
HDLBP-242ENST00000488013 Q6ZUT4 128 aa7.49□□□□□ -1.21
HDLBP-242ENST00000488013 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
HDLBP-242ENST00000488013 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
HDLBP-242ENST00000488013 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
HDLBP-242ENST00000488013 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 PRSS29PA6NIE9 313 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 SYS1-DBNDD2H3BUS1 97 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 LY6G6CO95867 125 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 RYR3Q15413 4870 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 UBE2WQ96B02 151 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 TM2D2Q9BX73 214 aa7.48□□□□□ -1.21
HDLBP-242ENST00000488013 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
HDLBP-242ENST00000488013 PLNP26678 52 aa7.47□□□□□ -1.21
HDLBP-242ENST00000488013 KRTDAPP60985 99 aa7.47□□□□□ -1.21
HDLBP-242ENST00000488013 HERVK_113P63121 156 aa7.47□□□□□ -1.21
HDLBP-242ENST00000488013 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-242ENST00000488013 GEMIN7Q9H840 131 aaKnown RBP7.47□□□□□ -1.21
HDLBP-242ENST00000488013 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.22
HDLBP-242ENST00000488013 F8VRH5 84 aa7.46□□□□□ -1.22
HDLBP-242ENST00000488013 UBE2D1P51668 147 aa7.46□□□□□ -1.22
HDLBP-242ENST00000488013 FAM19A3Q7Z5A8 133 aa7.46□□□□□ -1.22
HDLBP-242ENST00000488013 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
HDLBP-242ENST00000488013 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
HDLBP-242ENST00000488013 CHTOPQ9Y3Y2 248 aaKnown RBP7.46□□□□□ -1.22
HDLBP-242ENST00000488013 TINCRA0A1B0GVN0 87 aa7.45□□□□□ -1.22
HDLBP-242ENST00000488013 C3orf79P0CE67 100 aa7.45□□□□□ -1.22
HDLBP-242ENST00000488013 CD164L2Q6UWJ8 174 aa7.45□□□□□ -1.22
HDLBP-242ENST00000488013 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
HDLBP-242ENST00000488013 LINC00173Q6ZV60 143 aa7.45□□□□□ -1.22
HDLBP-242ENST00000488013 OR10D4PQ8NGN7 298 aa7.45□□□□□ -1.22
HDLBP-242ENST00000488013 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
HDLBP-242ENST00000488013 H0Y8G0 127 aa7.44□□□□□ -1.22
HDLBP-242ENST00000488013 H3BRM9 83 aa7.44□□□□□ -1.22
HDLBP-242ENST00000488013 DPM2O94777 84 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms