RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 BTF3L4Q96K17 158 aa8.02□□□□□ -1.13
ITSN1-229ENST00000487427 VPS13BQ7Z7G8 4022 aa8.01□□□□□ -1.13
ITSN1-229ENST00000487427 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
ITSN1-229ENST00000487427 VCYO14598 125 aa8.01□□□□□ -1.13
ITSN1-229ENST00000487427 CHCHD10Q8WYQ3 142 aaPredicted RBP8.01□□□□□ -1.13
ITSN1-229ENST00000487427 TMEM101Q96IK0 257 aa8.01□□□□□ -1.13
ITSN1-229ENST00000487427 TMEM242Q9NWH2 141 aa8.01□□□□□ -1.13
ITSN1-229ENST00000487427 A0A1B0GW15 77 aa8□□□□□ -1.13
ITSN1-229ENST00000487427 SLPIP03973 132 aa8□□□□□ -1.13
ITSN1-229ENST00000487427 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
ITSN1-229ENST00000487427 OR5A1Q8NGJ0 315 aa8□□□□□ -1.13
ITSN1-229ENST00000487427 IGHV3-64A0A075B6Q5 118 aa7.99□□□□□ -1.13
ITSN1-229ENST00000487427 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
ITSN1-229ENST00000487427 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
ITSN1-229ENST00000487427 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
ITSN1-229ENST00000487427 C15orf56Q8N910 161 aa7.99□□□□□ -1.13
ITSN1-229ENST00000487427 NRACQ8N912 160 aa7.99□□□□□ -1.13
ITSN1-229ENST00000487427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
ITSN1-229ENST00000487427 C7orf77A4D0Y5 90 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 LINC00862A6NCI5 91 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 PPP1R2P9O14990 202 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 FCER1GP30273 86 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 CAMPP49913 170 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
ITSN1-229ENST00000487427 KIR2DL4Q99706 377 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 CDC42SE2Q9NRR3 84 aa7.98□□□□□ -1.13
ITSN1-229ENST00000487427 LINC00959A0A1B0GUT2 108 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 S100A8P05109 93 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
ITSN1-229ENST00000487427 SMAGPQ0VAQ4 97 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 FOXI1Q12951 378 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
ITSN1-229ENST00000487427 ZNF664Q8N3J9 261 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
ITSN1-229ENST00000487427 TRBV24-1A0A075B6N3 115 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 PANO1I0J062 215 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 CCL25O15444 150 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 CKS2P33552 79 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 XCL1P47992 114 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 SS18Q15532 418 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 C20orf78Q9BR46 151 aa7.96□□□□□ -1.14
ITSN1-229ENST00000487427 CSDC2Q9Y534 153 aaKnown RBP7.96□□□□□ -1.14
ITSN1-229ENST00000487427 GVQW2A0A096LPI5 108 aaPredicted RBP7.95□□□□□ -1.14
ITSN1-229ENST00000487427 LOC100996750A0A140TA64 210 aa7.95□□□□□ -1.14
ITSN1-229ENST00000487427 F8W036 122 aa7.95□□□□□ -1.14
ITSN1-229ENST00000487427 RPL32P62910 135 aaKnown RBP7.95□□□□□ -1.14
ITSN1-229ENST00000487427 HBBP68871 147 aa7.95□□□□□ -1.14
ITSN1-229ENST00000487427 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
ITSN1-229ENST00000487427 KRTAP4-6Q9BYQ5 205 aa7.95□□□□□ -1.14
ITSN1-229ENST00000487427 A0A1B0GXF2 115 aa7.94□□□□□ -1.14
ITSN1-229ENST00000487427 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
ITSN1-229ENST00000487427 TCAPO15273 167 aa7.94□□□□□ -1.14
ITSN1-229ENST00000487427 RAB14P61106 215 aa7.94□□□□□ -1.14
ITSN1-229ENST00000487427 RPL37AP61513 92 aaKnown RBP7.94□□□□□ -1.14
ITSN1-229ENST00000487427 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
ITSN1-229ENST00000487427 CD164L2Q6UWJ8 174 aa7.94□□□□□ -1.14
ITSN1-229ENST00000487427 TMEM18Q96B42 140 aa7.94□□□□□ -1.14
ITSN1-229ENST00000487427 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 C1orf196B1AJZ1 125 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 TNFRSF6BO95407 300 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 PPBPP02775 128 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
ITSN1-229ENST00000487427 A0A087WYN8 130 aa7.92□□□□□ -1.14
ITSN1-229ENST00000487427 PHOX2AO14813 284 aa7.92□□□□□ -1.14
ITSN1-229ENST00000487427 COX6A2Q02221 97 aa7.92□□□□□ -1.14
ITSN1-229ENST00000487427 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
ITSN1-229ENST00000487427 D6R8Y8 96 aa7.91□□□□□ -1.14
ITSN1-229ENST00000487427 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
ITSN1-229ENST00000487427 PNRC1Q12796 327 aaPredicted RBP7.91□□□□□ -1.14
ITSN1-229ENST00000487427 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
ITSN1-229ENST00000487427 PRSS3P2Q8NHM4 247 aa7.91□□□□□ -1.14
ITSN1-229ENST00000487427 ZNF561-AS1K7EIQ3 104 aa7.9□□□□□ -1.14
ITSN1-229ENST00000487427 OXTP01178 125 aa7.9□□□□□ -1.14
ITSN1-229ENST00000487427 MT-ND4LP03901 98 aa7.9□□□□□ -1.14
ITSN1-229ENST00000487427 SMIM2Q9BVW6 85 aa7.9□□□□□ -1.14
ITSN1-229ENST00000487427 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
ITSN1-229ENST00000487427 HERC1Q15751 4861 aa7.9□□□□□ -1.15
ITSN1-229ENST00000487427 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 COX7A2LO14548 114 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 NPYP01303 97 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 RNASE13Q5GAN3 156 aaKnown RBP7.89□□□□□ -1.15
ITSN1-229ENST00000487427 TMEM136Q6ZRR5 245 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 ORMDL3Q8N138 153 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 LINC00526Q96FQ7 95 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 PKIGQ9Y2B9 76 aa7.89□□□□□ -1.15
ITSN1-229ENST00000487427 MALP21145 153 aa7.88□□□□□ -1.15
ITSN1-229ENST00000487427 RPL39P62891 51 aaKnown RBP7.88□□□□□ -1.15
ITSN1-229ENST00000487427 MAJINQ3KP22 176 aa7.88□□□□□ -1.15
ITSN1-229ENST00000487427 Q6ZUT4 128 aa7.88□□□□□ -1.15
ITSN1-229ENST00000487427 CARD19Q96LW7 228 aa7.88□□□□□ -1.15
ITSN1-229ENST00000487427 SPANXA1Q9NS26 97 aa7.88□□□□□ -1.15
ITSN1-229ENST00000487427 LINC00474Q9P2X8 69 aa7.88□□□□□ -1.15
ITSN1-229ENST00000487427 IGKV2-24A0A0C4DH68 120 aa7.87□□□□□ -1.15
ITSN1-229ENST00000487427 RAB5AP20339 215 aa7.87□□□□□ -1.15
ITSN1-229ENST00000487427 SYCNQ0VAF6 134 aa7.87□□□□□ -1.15
ITSN1-229ENST00000487427 PRELID3AQ96N28 172 aa7.87□□□□□ -1.15
ITSN1-229ENST00000487427 A0A096LNI7 61 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms