RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 SMDT1Q9H4I9 107 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
CLDN11-207ENST00000486975 TRBV27A0A0K0K1C4 114 aa9.25□□□□□ -0.93
CLDN11-207ENST00000486975 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
CLDN11-207ENST00000486975 TSHBP01222 138 aa9.25□□□□□ -0.93
CLDN11-207ENST00000486975 RPL23P62829 140 aaKnown RBP9.25□□□□□ -0.93
CLDN11-207ENST00000486975 RIGQ13278 110 aa9.25□□□□□ -0.93
CLDN11-207ENST00000486975 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
CLDN11-207ENST00000486975 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
CLDN11-207ENST00000486975 GAGE12HA6NDE8 117 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 KRTAP29-1A8MX34 341 aaPredicted RBP9.24□□□□□ -0.93
CLDN11-207ENST00000486975 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
CLDN11-207ENST00000486975 CFAP161Q6P656 301 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 NAT8BQ9UHF3 227 aa9.24□□□□□ -0.93
CLDN11-207ENST00000486975 IGHV3-64A0A075B6Q5 118 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 C9JQL5 133 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 PPP1R17O96001 155 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 SLPIP03973 132 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 RPS10P46783 165 aaKnown RBP9.23□□□□□ -0.93
CLDN11-207ENST00000486975 LINC00310P59036 64 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
CLDN11-207ENST00000486975 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
CLDN11-207ENST00000486975 BTF3L4Q96K17 158 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 TMEM242Q9NWH2 141 aa9.23□□□□□ -0.93
CLDN11-207ENST00000486975 IGKV3OR2-268A0A0C4DH90 116 aa9.22□□□□□ -0.93
CLDN11-207ENST00000486975 PANO1I0J062 215 aa9.22□□□□□ -0.93
CLDN11-207ENST00000486975 PEA15Q15121 130 aa9.22□□□□□ -0.93
CLDN11-207ENST00000486975 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
CLDN11-207ENST00000486975 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.94
CLDN11-207ENST00000486975 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.94
CLDN11-207ENST00000486975 ADIRFQ15847 76 aa9.21□□□□□ -0.94
CLDN11-207ENST00000486975 KRTAP4-11Q9BYQ6 195 aa9.21□□□□□ -0.94
CLDN11-207ENST00000486975 A0A1B0GW15 77 aa9.2□□□□□ -0.94
CLDN11-207ENST00000486975 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
CLDN11-207ENST00000486975 VCYO14598 125 aa9.2□□□□□ -0.94
CLDN11-207ENST00000486975 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
CLDN11-207ENST00000486975 SRSF3P84103 164 aaKnown RBP9.2□□□□□ -0.94
CLDN11-207ENST00000486975 FOXI1Q12951 378 aa9.2□□□□□ -0.94
CLDN11-207ENST00000486975 NRACQ8N912 160 aa9.2□□□□□ -0.94
CLDN11-207ENST00000486975 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
CLDN11-207ENST00000486975 LINC00862A6NCI5 91 aa9.19□□□□□ -0.94
CLDN11-207ENST00000486975 SUMO2P61956 95 aaKnown RBP9.19□□□□□ -0.94
CLDN11-207ENST00000486975 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
CLDN11-207ENST00000486975 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
CLDN11-207ENST00000486975 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
CLDN11-207ENST00000486975 SMKR1H3BMG3 65 aa9.18□□□□□ -0.94
CLDN11-207ENST00000486975 PPP1R2P9O14990 202 aa9.18□□□□□ -0.94
CLDN11-207ENST00000486975 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
CLDN11-207ENST00000486975 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 CCL25O15444 150 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 OXTP01178 125 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 FCER1GP30273 86 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 RPL32P62910 135 aaKnown RBP9.17□□□□□ -0.94
CLDN11-207ENST00000486975 SMAGPQ0VAQ4 97 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
CLDN11-207ENST00000486975 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
CLDN11-207ENST00000486975 S100A8P05109 93 aa9.16□□□□□ -0.94
CLDN11-207ENST00000486975 XCL1P47992 114 aa9.16□□□□□ -0.94
CLDN11-207ENST00000486975 SS18Q15532 418 aa9.16□□□□□ -0.94
CLDN11-207ENST00000486975 A0A087WYN8 130 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 TCAPO15273 167 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 CAMPP49913 170 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 PLAC8Q9NZF1 115 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
CLDN11-207ENST00000486975 A0A1B0GXF2 115 aa9.14□□□□□ -0.95
CLDN11-207ENST00000486975 RAB14P61106 215 aa9.14□□□□□ -0.95
CLDN11-207ENST00000486975 HBBP68871 147 aa9.14□□□□□ -0.95
CLDN11-207ENST00000486975 COX6A2Q02221 97 aa9.14□□□□□ -0.95
CLDN11-207ENST00000486975 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
CLDN11-207ENST00000486975 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
CLDN11-207ENST00000486975 F8W036 122 aa9.13□□□□□ -0.95
CLDN11-207ENST00000486975 CKS2P33552 79 aa9.13□□□□□ -0.95
CLDN11-207ENST00000486975 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
CLDN11-207ENST00000486975 PHOX2AO14813 284 aa9.12□□□□□ -0.95
CLDN11-207ENST00000486975 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
CLDN11-207ENST00000486975 PPBPP02775 128 aa9.12□□□□□ -0.95
CLDN11-207ENST00000486975 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
CLDN11-207ENST00000486975 PRSS3P2Q8NHM4 247 aa9.12□□□□□ -0.95
CLDN11-207ENST00000486975 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
CLDN11-207ENST00000486975 MRPL54Q6P161 138 aaKnown RBP9.11□□□□□ -0.95
CLDN11-207ENST00000486975 ATP5L2Q7Z4Y8 100 aa9.11□□□□□ -0.95
CLDN11-207ENST00000486975 SMIM2Q9BVW6 85 aa9.11□□□□□ -0.95
CLDN11-207ENST00000486975 LRP1Q07954 4544 aaKnown RBP9.1□□□□□ -0.95
CLDN11-207ENST00000486975 LCE5AQ5TCM9 118 aa9.1□□□□□ -0.95
CLDN11-207ENST00000486975 Q6ZUT4 128 aa9.1□□□□□ -0.95
CLDN11-207ENST00000486975 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
CLDN11-207ENST00000486975 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms