RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 HTN1P15515 57 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 PDE6HQ13956 83 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 PSG3Q16557 428 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 TMEM97Q5BJF2 176 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 ZNF493Q6ZR52 646 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 FA2HQ7L5A8 372 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 LINC00305Q7Z4B0 112 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 NEXN-AS1Q8NBZ9 246 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 Q9H3A6 140 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 HIGD1BQ9P298 99 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 SPINK4O60575 86 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 PRB4P10163 310 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 LINC00315P59091 139 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 HAMPP81172 84 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 ESRGQ1W209 222 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 Q86TA4 180 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 BLNKQ8WV28 456 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 LINC01587Q99440 93 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 SLC25A39Q9BZJ4 359 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 HIGD1AQ9Y241 93 aa4.42□□□□□ -1.7
TMEM39A-209ENST00000486235 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 PGPA6NDG6 321 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 LINC01549A6NIU2 74 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 A8MTW9 85 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 K7EP34 96 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 DUSP14O95147 198 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 KRTAP10-1P60331 282 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 TAL2Q16559 108 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 LINC01620Q4KN68 170 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 AMMECR1LQ6DCA0 310 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 UFSP1Q6NVU6 142 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 RNF182Q8N6D2 247 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 C17orf77Q96MU5 243 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 NOP10Q9NPE3 64 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 RPH3ALQ9UNE2 315 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
TMEM39A-209ENST00000486235 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.7
TMEM39A-209ENST00000486235 TRAV8-2A0A0B4J237 113 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 MUC21A0A0G2JKD1 596 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 MUC21A0A140T8X8 626 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 HBDP02042 147 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 DNAH10OSP0CZ25 163 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 FABP2P12104 132 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 MUC21Q5SSG8 566 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 SAMD13Q5VXD3 122 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 PATE2Q6UY27 113 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 ORMDL3Q8N138 153 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 UPK3BQ9BT76 320 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 TIMM8BQ9Y5J9 83 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.71
TMEM39A-209ENST00000486235 K7EMI3 77 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 ATP5LO75964 103 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 PYYP10082 97 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 C2orf91Q6ZV80 131 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 NEGR1Q7Z3B1 354 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 FER1L6-AS1Q8NA97 138 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 OR1B1Q8NGR6 318 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 OR10J6PQ8NGY7 276 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 C16orf74Q96GX8 76 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 PGLYRP4Q96LB8 373 aa4.39□□□□□ -1.71
TMEM39A-209ENST00000486235 A0A087WTM6 91 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 TRAV5A0A0B4J249 113 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 A0A1B0GV72 72 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 A0A1W2PPM0 123 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 F8W1H4 67 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 ORM2P19652 201 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 GATA2P23769 480 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 SEC61GP60059 68 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 RPL24P83731 157 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 OR8A1Q8NGG7 326 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 TMEM263Q8WUH6 116 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 SHANK2-AS3Q9BTD1 123 aa4.38□□□□□ -1.71
TMEM39A-209ENST00000486235 TRBV19A0A075B6N1 114 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 A0A096LPF7 62 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 H3BRN7 92 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 NXPH4O95158 308 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 FGF6P10767 208 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 LINC00612Q8N6U2 182 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 IFI27L1Q96BM0 104 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 LINC00479Q96M42 142 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 PRELID3AQ96N28 172 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 MAP1LC3AQ9H492 121 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 SPANXA1Q9NS26 97 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 PSG8Q9UQ74 426 aa4.37□□□□□ -1.71
TMEM39A-209ENST00000486235 IGLV5-37A0A075B6J1 123 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 TRAV8-6A0A0B4J262 113 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms