RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
TMEM39A-208ENST00000486159 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-208ENST00000486159 LRP1BQ9NZR2 4599 aa6.54□□□□□ -1.36
TMEM39A-208ENST00000486159 TRGV1A0A0A0MS02 117 aa6.54□□□□□ -1.36
TMEM39A-208ENST00000486159 DPM2O94777 84 aa6.54□□□□□ -1.36
TMEM39A-208ENST00000486159 CRYBA4P53673 196 aa6.54□□□□□ -1.36
TMEM39A-208ENST00000486159 C14orf144Q96I85 54 aa6.54□□□□□ -1.36
TMEM39A-208ENST00000486159 MRPS16Q9Y3D3 137 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-208ENST00000486159 F8VRH5 84 aa6.53□□□□□ -1.36
TMEM39A-208ENST00000486159 IGKCP01834 107 aa6.53□□□□□ -1.36
TMEM39A-208ENST00000486159 DAD1P61803 113 aa6.53□□□□□ -1.36
TMEM39A-208ENST00000486159 SLC25A34Q6PIV7 304 aa6.53□□□□□ -1.36
TMEM39A-208ENST00000486159 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
TMEM39A-208ENST00000486159 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 M0R143 59 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 DLEU1O43261 78 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 TSHBP01222 138 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 COX8AP10176 69 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 HNRNPA3P51991 378 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 SMAGPQ0VAQ4 97 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 C20orf203Q8NBC4 194 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 NOP10Q9NPE3 64 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 PYGO1Q9Y3Y4 419 aa6.52□□□□□ -1.37
TMEM39A-208ENST00000486159 TRBV6-4A0A1B0GX49 114 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 K7EQD1 137 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 RPL36AP83881 106 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 PMVKQ15126 192 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 MAJINQ3KP22 176 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 Q6ZTI0 123 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 DAZ4Q86SG3 579 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 Q8N3U1 123 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 RPL36ALQ969Q0 106 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 DAZ3Q9NR90 486 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 APOBP04114 4563 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-208ENST00000486159 TRBV7-3A0A075B6L6 115 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 F5H768 121 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 SIVA1O15304 175 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 COTL1Q14019 142 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 C1orf134Q5TEV5 83 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 NEGR1Q7Z3B1 354 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 MRPL35Q9NZE8 188 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 HHLA3Q9XRX5 114 aa6.5□□□□□ -1.37
TMEM39A-208ENST00000486159 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 CTAG1AP78358 180 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 TMEM97Q5BJF2 176 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 Q6ZSN1 163 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 ZNRF2Q8NHG8 242 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 ZNF479Q96JC4 524 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 C2orf88Q9BSF0 95 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 TIMM21Q9BVV7 248 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 CST9LQ9H4G1 147 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 LINC00588Q9Y4M8 146 aa6.49□□□□□ -1.37
TMEM39A-208ENST00000486159 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
TMEM39A-208ENST00000486159 BOD1L2Q8IYS8 172 aa6.48□□□□□ -1.37
TMEM39A-208ENST00000486159 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
TMEM39A-208ENST00000486159 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
TMEM39A-208ENST00000486159 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
TMEM39A-208ENST00000486159 TRGV4A0A0C4DH28 118 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 TEX48A0A1B0GUV7 120 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 H7C423 109 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 GAGE7O76087 117 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 GAGE12FP0CL80 117 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 GAGE12GP0CL81 117 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 GAGE12IP0CL82 117 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 UBE2D3P61077 147 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 HERVK_113P61574 105 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 UBE2D2P62837 147 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 RPL39P62891 51 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 STPG4Q8N801 248 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 SLC25A29Q8N8R3 303 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 SNHG12Q9BXW3 62 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 VCX2Q9H322 139 aa6.47□□□□□ -1.37
TMEM39A-208ENST00000486159 A0A0J9YY99 117 aa6.46□□□□□ -1.38
TMEM39A-208ENST00000486159 MRPS36P82909 103 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-208ENST00000486159 NFE4Q86UQ8 179 aa6.46□□□□□ -1.38
TMEM39A-208ENST00000486159 C15orf53Q8NAA6 179 aa6.46□□□□□ -1.38
TMEM39A-208ENST00000486159 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
TMEM39A-208ENST00000486159 CSDC2Q9Y534 153 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-208ENST00000486159 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 TRAV26-1A0A087WT03 109 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 C16orf90A8MZG2 172 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 E9PLD3 99 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 H3BS24 57 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 ATP5G1P05496 136 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 FGF6P10767 208 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 FUSP35637 526 aaKnown RBP eCLIP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms