RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 STPG4Q8N801 248 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 TSKUQ8WUA8 353 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 CCL25O15444 150 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 ALKAL2Q6UX46 152 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 AKAP14Q86UN6 197 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 ZNF664Q8N3J9 261 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 SMIM7Q9BQ49 75 aa8.69□□□□□ -1.02
SCAF4-206ENST00000485790 HIGD1CA8MV81 97 aa8.68□□□□□ -1.02
SCAF4-206ENST00000485790 ESDP10768 282 aa8.68□□□□□ -1.02
SCAF4-206ENST00000485790 FCER1GP30273 86 aa8.68□□□□□ -1.02
SCAF4-206ENST00000485790 RIGQ13278 110 aa8.68□□□□□ -1.02
SCAF4-206ENST00000485790 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
SCAF4-206ENST00000485790 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
SCAF4-206ENST00000485790 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 TRBV27A0A0K0K1C4 114 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 ZNF727A8MUV8 499 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 C1orf196B1AJZ1 125 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 TSHBP01222 138 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 RAB4AP20338 218 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 MALP21145 153 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
SCAF4-206ENST00000485790 MRPL52Q86TS9 123 aaKnown RBP8.67□□□□□ -1.02
SCAF4-206ENST00000485790 ISOC2Q96AB3 205 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 OSTCQ9NRP0 149 aa8.67□□□□□ -1.02
SCAF4-206ENST00000485790 C7orf77A4D0Y5 90 aa8.66□□□□□ -1.02
SCAF4-206ENST00000485790 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
SCAF4-206ENST00000485790 LINC01551Q86U37 167 aa8.66□□□□□ -1.02
SCAF4-206ENST00000485790 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
SCAF4-206ENST00000485790 KIR2DL4Q99706 377 aa8.66□□□□□ -1.02
SCAF4-206ENST00000485790 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
SCAF4-206ENST00000485790 MT1HL1P0DM35 61 aa8.65□□□□□ -1.02
SCAF4-206ENST00000485790 TMEM18Q96B42 140 aa8.65□□□□□ -1.02
SCAF4-206ENST00000485790 A0A096LNI7 61 aa8.64□□□□□ -1.03
SCAF4-206ENST00000485790 COX7A2LO14548 114 aa8.64□□□□□ -1.03
SCAF4-206ENST00000485790 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
SCAF4-206ENST00000485790 SPINK6Q6UWN8 80 aa8.64□□□□□ -1.03
SCAF4-206ENST00000485790 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
SCAF4-206ENST00000485790 PPP1R2P9O14990 202 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
SCAF4-206ENST00000485790 FAM74A3Q4VXF1 159 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
SCAF4-206ENST00000485790 TCAPO15273 167 aa8.62□□□□□ -1.03
SCAF4-206ENST00000485790 GAS8-AS1O95177 125 aa8.62□□□□□ -1.03
SCAF4-206ENST00000485790 APOMO95445 188 aa8.62□□□□□ -1.03
SCAF4-206ENST00000485790 CAMPP49913 170 aa8.62□□□□□ -1.03
SCAF4-206ENST00000485790 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
SCAF4-206ENST00000485790 Q6ZRP5 223 aa8.62□□□□□ -1.03
SCAF4-206ENST00000485790 NUP35Q8NFH5 326 aa8.62□□□□□ -1.03
SCAF4-206ENST00000485790 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
SCAF4-206ENST00000485790 LINC00862A6NCI5 91 aa8.61□□□□□ -1.03
SCAF4-206ENST00000485790 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
SCAF4-206ENST00000485790 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
SCAF4-206ENST00000485790 A0A1B0GW15 77 aa8.6□□□□□ -1.03
SCAF4-206ENST00000485790 SRP19P09132 144 aaKnown RBP8.6□□□□□ -1.03
SCAF4-206ENST00000485790 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
SCAF4-206ENST00000485790 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
SCAF4-206ENST00000485790 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 SMKR1H3BMG3 65 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 CKS2P33552 79 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 C2orf48Q96LS8 159 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 C20orf78Q9BR46 151 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 UBE2D4Q9Y2X8 147 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 V9GYV3 84 aa8.59□□□□□ -1.03
SCAF4-206ENST00000485790 S100A8P05109 93 aa8.58□□□□□ -1.04
SCAF4-206ENST00000485790 NRACQ8N912 160 aa8.58□□□□□ -1.04
SCAF4-206ENST00000485790 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
SCAF4-206ENST00000485790 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
SCAF4-206ENST00000485790 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
SCAF4-206ENST00000485790 F8W036 122 aa8.57□□□□□ -1.04
SCAF4-206ENST00000485790 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
SCAF4-206ENST00000485790 PEA15Q15121 130 aa8.57□□□□□ -1.04
SCAF4-206ENST00000485790 ADIRFQ15847 76 aa8.57□□□□□ -1.04
SCAF4-206ENST00000485790 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
SCAF4-206ENST00000485790 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
SCAF4-206ENST00000485790 TRBV24-1A0A075B6N3 115 aa8.56□□□□□ -1.04
SCAF4-206ENST00000485790 F8WDY8 70 aa8.56□□□□□ -1.04
SCAF4-206ENST00000485790 MRPL51Q4U2R6 128 aaKnown RBP8.56□□□□□ -1.04
SCAF4-206ENST00000485790 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
SCAF4-206ENST00000485790 RPL23P62829 140 aaKnown RBP8.55□□□□□ -1.04
SCAF4-206ENST00000485790 RPL32P62910 135 aaKnown RBP8.55□□□□□ -1.04
SCAF4-206ENST00000485790 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
SCAF4-206ENST00000485790 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
SCAF4-206ENST00000485790 SMDT1Q9H4I9 107 aa8.55□□□□□ -1.04
SCAF4-206ENST00000485790 PPBPP02775 128 aa8.54□□□□□ -1.04
SCAF4-206ENST00000485790 MT-ND6P03923 174 aa8.54□□□□□ -1.04
SCAF4-206ENST00000485790 KRTAP10-8P60410 259 aa8.54□□□□□ -1.04
SCAF4-206ENST00000485790 OR10D4PQ8NGN7 298 aa8.54□□□□□ -1.04
SCAF4-206ENST00000485790 IMMP2LQ96T52 175 aa8.54□□□□□ -1.04
SCAF4-206ENST00000485790 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
SCAF4-206ENST00000485790 RAB5AP20339 215 aa8.53□□□□□ -1.04
SCAF4-206ENST00000485790 C9orf116Q5BN46 136 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms