RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	IGKV2-24	A0A0C4DH68	120 aa		6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550		A8MWL6	223 aa		6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550	NCR2	O95944	276 aa		6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550	RPS10	P46783	165 aa	Known RBP	6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550	BLOC1S1	P78537	153 aa		6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550	PRSS3P2	Q8NHM4	247 aa		6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550	SPACA4	Q8TDM5	124 aa		6.69	□□□□□ -1.34
HMGN1-215	ENST00000485550	FAM231B	A6NCW3	169 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	TMEM250	H0YL14	139 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550		I3L3M4	83 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	XCL1	P47992	114 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	MAJIN	Q3KP22	176 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	TEX261	Q6UWH6	196 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	FAM231D	Q6ZW35	169 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	AKAP14	Q86UN6	197 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	LINC00526	Q96FQ7	95 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550	TMEM242	Q9NWH2	141 aa		6.68	□□□□□ -1.34
HMGN1-215	ENST00000485550		H7C423	109 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	PHOX2A	O14813	284 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	NDUFS6	O75380	124 aa	Known RBP	6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	OR5A1	Q8NGJ0	315 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	LYPD6B	Q8NI32	183 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	BORCS7	Q96B45	105 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	RNF185	Q96GF1	192 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	TMEM101	Q96IK0	257 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	BTF3L4	Q96K17	158 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	EIF5A2	Q9GZV4	153 aa	Known RBP	6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	ST20	Q9HBF5	79 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	PLAC8	Q9NZF1	115 aa		6.67	□□□□□ -1.34
HMGN1-215	ENST00000485550	TRBV6-5	A0A0K0K1A5	114 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550	LINC00959	A0A1B0GUT2	108 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550	CCL25	O15444	150 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550	TSHB	P01222	138 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550	FOXI1	Q12951	378 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550	STPG4	Q8N801	248 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550	SMIM7	Q9BQ49	75 aa		6.66	□□□□□ -1.34
HMGN1-215	ENST00000485550		A0A1B0GUT8	65 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	HIGD1C	A8MV81	97 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	SMKR1	H3BMG3	65 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	ESD	P10768	282 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	RAB4A	P20338	218 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	CT83	Q5H943	113 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	LINC01551	Q86U37	167 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	AMN1	Q8IY45	258 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	C7orf33	Q8WU49	177 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550	TSKU	Q8WUA8	353 aa		6.65	□□□□□ -1.34
HMGN1-215	ENST00000485550		A0A096LNI7	61 aa		6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	ZNF727	A8MUV8	499 aa		6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	ZNF25	P17030	456 aa	Predicted RBP	6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	POLR2K	P53803	58 aa	Known RBP	6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	MRAP2	Q96G30	205 aa		6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	TMEM191A	Q9H0A3	160 aa		6.64	□□□□□ -1.35
HMGN1-215	ENST00000485550	SRP19	P09132	144 aa	Known RBP	6.63	□□□□□ -1.35
HMGN1-215	ENST00000485550	SS18	Q15532	418 aa		6.63	□□□□□ -1.35
HMGN1-215	ENST00000485550	ZNF664	Q8N3J9	261 aa		6.63	□□□□□ -1.35
HMGN1-215	ENST00000485550	CDC42SE2	Q9NRR3	84 aa		6.63	□□□□□ -1.35
HMGN1-215	ENST00000485550	IGHV1-58	A0A0C4DH39	117 aa		6.62	□□□□□ -1.35
HMGN1-215	ENST00000485550	C7orf77	A4D0Y5	90 aa		6.62	□□□□□ -1.35
HMGN1-215	ENST00000485550	FCER1G	P30273	86 aa		6.62	□□□□□ -1.35
HMGN1-215	ENST00000485550	RNASE13	Q5GAN3	156 aa	Known RBP	6.62	□□□□□ -1.35
HMGN1-215	ENST00000485550	FAM210A	Q96ND0	272 aa		6.62	□□□□□ -1.35
HMGN1-215	ENST00000485550	OSTC	Q9NRP0	149 aa		6.62	□□□□□ -1.35
HMGN1-215	ENST00000485550	TRBV27	A0A0K0K1C4	114 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	ZNF561-AS1	K7EIQ3	104 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	VCY	O14598	125 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	RIG	Q13278	110 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	CD164L2	Q6UWJ8	174 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	MRPL52	Q86TS9	123 aa	Known RBP	6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	NUP35	Q8NFH5	326 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	CARD19	Q96LW7	228 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550		V9GYV3	84 aa		6.61	□□□□□ -1.35
HMGN1-215	ENST00000485550	PRR3	P79522	188 aa	Known RBP	6.6	□□□□□ -1.35
HMGN1-215	ENST00000485550	SYCN	Q0VAF6	134 aa		6.6	□□□□□ -1.35
HMGN1-215	ENST00000485550	LPA	P08519	4548 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	IGLV4-69	A0A075B6H9	119 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	TRAV13-1	A0A0B4J241	112 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	MAL	P21145	153 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	RPL23	P62829	140 aa	Known RBP	6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	GAGE2B	Q13066	116 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	TMEM241	Q24JQ0	296 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	LCE5A	Q5TCM9	118 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	NRAC	Q8N912	160 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	ISOC2	Q96AB3	205 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550	LINC01600	Q96MT4	127 aa		6.59	□□□□□ -1.35
HMGN1-215	ENST00000485550		C9JQL5	133 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	CAMP	P49913	170 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	SUMO2	P61956	95 aa	Known RBP	6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	ADIRF	Q15847	76 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	MRPL51	Q4U2R6	128 aa	Known RBP	6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	C5orf38	Q86SI9	138 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	KIR2DL4	Q99706	377 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	LINC00474	Q9P2X8	69 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	NAT8B	Q9UHF3	227 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	UBE2D4	Q9Y2X8	147 aa		6.58	□□□□□ -1.36
HMGN1-215	ENST00000485550	C1orf196	B1AJZ1	125 aa		6.57	□□□□□ -1.36
HMGN1-215	ENST00000485550	COX7A2L	O14548	114 aa		6.57	□□□□□ -1.36
HMGN1-215	ENST00000485550	SRSF3	P84103	164 aa	Known RBP	6.57	□□□□□ -1.36
HMGN1-215	ENST00000485550	ANKRD39	Q53RE8	183 aa		6.57	□□□□□ -1.36
HMGN1-215	ENST00000485550	FAM104B	Q5XKR9	115 aa		6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms