RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ST20Q9HBF5 79 aa12.01□□□□□ -0.49
COL27A1-205ENST00000485397 MRAP2Q96G30 205 aa12□□□□□ -0.49
COL27A1-205ENST00000485397 CARD19Q96LW7 228 aa12□□□□□ -0.49
COL27A1-205ENST00000485397 POLR2KP53803 58 aaKnown RBP11.99□□□□□ -0.49
COL27A1-205ENST00000485397 CT83Q5H943 113 aa11.99□□□□□ -0.49
COL27A1-205ENST00000485397 BORCS7Q96B45 105 aa11.99□□□□□ -0.49
COL27A1-205ENST00000485397 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
COL27A1-205ENST00000485397 BLOC1S1P78537 153 aa11.98□□□□□ -0.49
COL27A1-205ENST00000485397 SS18Q15532 418 aa11.98□□□□□ -0.49
COL27A1-205ENST00000485397 ALKAL2Q6UX46 152 aa11.98□□□□□ -0.49
COL27A1-205ENST00000485397 LINC00474Q9P2X8 69 aa11.98□□□□□ -0.49
COL27A1-205ENST00000485397 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
COL27A1-205ENST00000485397 CD164L2Q6UWJ8 174 aa11.97□□□□□ -0.49
COL27A1-205ENST00000485397 MRPL52Q86TS9 123 aaKnown RBP11.97□□□□□ -0.49
COL27A1-205ENST00000485397 TMEM191AQ9H0A3 160 aa11.97□□□□□ -0.49
COL27A1-205ENST00000485397 A0A1B0GUT8 65 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 HIGD1CA8MV81 97 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 RAB4AP20338 218 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 AMN1Q8IY45 258 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 TSKUQ8WUA8 353 aa11.96□□□□□ -0.49
COL27A1-205ENST00000485397 LRP2P98164 4655 aa11.95□□□□□ -0.5
COL27A1-205ENST00000485397 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
COL27A1-205ENST00000485397 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
COL27A1-205ENST00000485397 C7orf77A4D0Y5 90 aa11.95□□□□□ -0.5
COL27A1-205ENST00000485397 SPINK6Q6UWN8 80 aa11.95□□□□□ -0.5
COL27A1-205ENST00000485397 PKIGQ9Y2B9 76 aa11.95□□□□□ -0.5
COL27A1-205ENST00000485397 SMKR1H3BMG3 65 aa11.94□□□□□ -0.5
COL27A1-205ENST00000485397 LINC01551Q86U37 167 aa11.94□□□□□ -0.5
COL27A1-205ENST00000485397 FAM210AQ96ND0 272 aa11.94□□□□□ -0.5
COL27A1-205ENST00000485397 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
COL27A1-205ENST00000485397 CAMPP49913 170 aa11.93□□□□□ -0.5
COL27A1-205ENST00000485397 KRTAP10-8P60410 259 aa11.93□□□□□ -0.5
COL27A1-205ENST00000485397 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.54e-6■■□□□ 11.4
COL27A1-205ENST00000485397 IGLV4-69A0A075B6H9 119 aa11.92□□□□□ -0.5
COL27A1-205ENST00000485397 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
COL27A1-205ENST00000485397 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
COL27A1-205ENST00000485397 Q6ZRP5 223 aa11.92□□□□□ -0.5
COL27A1-205ENST00000485397 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
COL27A1-205ENST00000485397 A0A1B0GVG6 124 aa11.91□□□□□ -0.5
COL27A1-205ENST00000485397 VCYO14598 125 aa11.91□□□□□ -0.5
COL27A1-205ENST00000485397 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
COL27A1-205ENST00000485397 REG3GQ6UW15 175 aa11.91□□□□□ -0.5
COL27A1-205ENST00000485397 EIF5A2Q9GZV4 153 aaKnown RBP11.91□□□□□ -0.5
COL27A1-205ENST00000485397 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
COL27A1-205ENST00000485397 MALP21145 153 aa11.9□□□□□ -0.5
COL27A1-205ENST00000485397 FCER1GP30273 86 aa11.9□□□□□ -0.5
COL27A1-205ENST00000485397 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 A0A1W2PNN7 141 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 C1orf196B1AJZ1 125 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 COX7A2LO14548 114 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 NRACQ8N912 160 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 UBE2D4Q9Y2X8 147 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 V9GYV3 84 aa11.89□□□□□ -0.51
COL27A1-205ENST00000485397 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
COL27A1-205ENST00000485397 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
COL27A1-205ENST00000485397 RIGQ13278 110 aa11.88□□□□□ -0.51
COL27A1-205ENST00000485397 NUP35Q8NFH5 326 aa11.88□□□□□ -0.51
COL27A1-205ENST00000485397 CSDC2Q9Y534 153 aaKnown RBP11.88□□□□□ -0.51
COL27A1-205ENST00000485397 TRAV13-1A0A0B4J241 112 aa11.87□□□□□ -0.51
COL27A1-205ENST00000485397 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
COL27A1-205ENST00000485397 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
COL27A1-205ENST00000485397 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
COL27A1-205ENST00000485397 Q6ZUT4 128 aa11.86□□□□□ -0.51
COL27A1-205ENST00000485397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
COL27A1-205ENST00000485397 PPP1R17O96001 155 aa11.85□□□□□ -0.51
COL27A1-205ENST00000485397 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
COL27A1-205ENST00000485397 APOMO95445 188 aa11.84□□□□□ -0.51
COL27A1-205ENST00000485397 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
COL27A1-205ENST00000485397 MRPL51Q4U2R6 128 aaKnown RBP11.84□□□□□ -0.51
COL27A1-205ENST00000485397 C9orf116Q5BN46 136 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-205ENST00000485397 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
COL27A1-205ENST00000485397 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
COL27A1-205ENST00000485397 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
COL27A1-205ENST00000485397 RPL18AQ02543 176 aaKnown RBP11.82□□□□□ -0.52
COL27A1-205ENST00000485397 SPAG11BQ08648 103 aa11.82□□□□□ -0.52
COL27A1-205ENST00000485397 NAT8BQ9UHF3 227 aa11.82□□□□□ -0.52
COL27A1-205ENST00000485397 PSORS1C2Q9UIG4 136 aa11.82□□□□□ -0.52
COL27A1-205ENST00000485397 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
COL27A1-205ENST00000485397 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
COL27A1-205ENST00000485397 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
COL27A1-205ENST00000485397 TIMM21Q9BVV7 248 aa11.81□□□□□ -0.52
COL27A1-205ENST00000485397 PHF5AQ7RTV0 110 aaKnown RBP11.8□□□□□ -0.52
COL27A1-205ENST00000485397 TMEM18Q96B42 140 aa11.8□□□□□ -0.52
COL27A1-205ENST00000485397 MT-ND6P03923 174 aa11.79□□□□□ -0.52
COL27A1-205ENST00000485397 RPL39P62891 51 aaKnown RBP11.79□□□□□ -0.52
COL27A1-205ENST00000485397 FAM74A3Q4VXF1 159 aa11.79□□□□□ -0.52
COL27A1-205ENST00000485397 FAM104AQ969W3 186 aa11.79□□□□□ -0.52
COL27A1-205ENST00000485397 ADIRFQ15847 76 aa11.78□□□□□ -0.52
COL27A1-205ENST00000485397 C1orf137Q5JT78 98 aa11.78□□□□□ -0.52
COL27A1-205ENST00000485397 C20orf78Q9BR46 151 aa11.78□□□□□ -0.52
COL27A1-205ENST00000485397 TRBV24-1A0A075B6N3 115 aa11.77□□□□□ -0.53
COL27A1-205ENST00000485397 LINC00862A6NCI5 91 aa11.77□□□□□ -0.53
COL27A1-205ENST00000485397 C9JQL5 133 aa11.77□□□□□ -0.53
COL27A1-205ENST00000485397 CKS2P33552 79 aa11.77□□□□□ -0.53
COL27A1-205ENST00000485397 RNF151Q2KHN1 245 aa11.77□□□□□ -0.53
COL27A1-205ENST00000485397 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
COL27A1-205ENST00000485397 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms