RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 C3orf56Q8N813 242 aa9.34□□□□□ -0.91
CPNE1-225ENST00000483495 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
CPNE1-225ENST00000483495 H3BRM9 83 aa9.33□□□□□ -0.92
CPNE1-225ENST00000483495 SMAGPQ0VAQ4 97 aa9.33□□□□□ -0.92
CPNE1-225ENST00000483495 VAMP3Q15836 100 aa9.33□□□□□ -0.92
CPNE1-225ENST00000483495 RNASE13Q5GAN3 156 aaKnown RBP9.33□□□□□ -0.92
CPNE1-225ENST00000483495 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
CPNE1-225ENST00000483495 H7C423 109 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 MIFP14174 115 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 UBE2D1P51668 147 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 EGFEM1PQ0D2K5 195 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 Q6ZVH6 145 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 RNF183Q96D59 192 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 LEPROTO15243 131 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 DGAT2L7PQ6IED9 249 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 CEND1Q8N111 149 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 Q8NAQ8 132 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
CPNE1-225ENST00000483495 J3QQQ9 107 aa9.31□□□□□ -0.92
CPNE1-225ENST00000483495 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
CPNE1-225ENST00000483495 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
CPNE1-225ENST00000483495 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
CPNE1-225ENST00000483495 A8MZ25 164 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 GCSHP23434 173 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 FXYD2P54710 66 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 TIRAPP58753 221 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 BAHCC1Q9P281 2608 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 CCL25O15444 150 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 PRO0255Q9UI72 69 aa9.3□□□□□ -0.92
CPNE1-225ENST00000483495 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
CPNE1-225ENST00000483495 C9orf118A6NHY6 69 aa9.29□□□□□ -0.92
CPNE1-225ENST00000483495 SMIM13P0DJ93 91 aa9.29□□□□□ -0.92
CPNE1-225ENST00000483495 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
CPNE1-225ENST00000483495 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
CPNE1-225ENST00000483495 SCGB1D4Q6XE38 83 aa9.28□□□□□ -0.92
CPNE1-225ENST00000483495 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
CPNE1-225ENST00000483495 HIST1H4GQ99525 98 aa9.28□□□□□ -0.92
CPNE1-225ENST00000483495 A0A0J9YY99 117 aa9.28□□□□□ -0.92
CPNE1-225ENST00000483495 UBE2L6O14933 153 aa9.28□□□□□ -0.92
CPNE1-225ENST00000483495 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
CPNE1-225ENST00000483495 K7EP13 123 aa9.27□□□□□ -0.93
CPNE1-225ENST00000483495 DEFB4AO15263 64 aa9.27□□□□□ -0.93
CPNE1-225ENST00000483495 IGHV3-30-3P0DP02 117 aa9.27□□□□□ -0.93
CPNE1-225ENST00000483495 GYPEP15421 78 aa9.27□□□□□ -0.93
CPNE1-225ENST00000483495 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.93
CPNE1-225ENST00000483495 GEMIN7Q9H840 131 aaKnown RBP9.27□□□□□ -0.93
CPNE1-225ENST00000483495 LINC00242Q5T6M2 205 aa9.26□□□□□ -0.93
CPNE1-225ENST00000483495 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
CPNE1-225ENST00000483495 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
CPNE1-225ENST00000483495 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
CPNE1-225ENST00000483495 DAD1P61803 113 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 HERVK_113P63121 156 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 VSIG2Q96IQ7 327 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 IGHV3-64A0A075B6Q5 118 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
CPNE1-225ENST00000483495 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
CPNE1-225ENST00000483495 PAX4O43316 350 aa9.24□□□□□ -0.93
CPNE1-225ENST00000483495 COX6A2Q02221 97 aa9.24□□□□□ -0.93
CPNE1-225ENST00000483495 CMYA5Q8N3K9 4069 aa9.24□□□□□ -0.93
CPNE1-225ENST00000483495 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 H3BUT2 72 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 ATP5G1P05496 136 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 RAB37Q96AX2 223 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 SPINK8P0C7L1 97 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 GAGE6Q13070 117 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
CPNE1-225ENST00000483495 NHP2Q9NX24 153 aaKnown RBP9.23□□□□□ -0.93
CPNE1-225ENST00000483495 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
CPNE1-225ENST00000483495 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
CPNE1-225ENST00000483495 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
CPNE1-225ENST00000483495 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPNE1-225ENST00000483495 CHCHD5Q9BSY4 110 aa9.22□□□□□ -0.93
CPNE1-225ENST00000483495 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.93
CPNE1-225ENST00000483495 A6NJY4 79 aa9.21□□□□□ -0.93
CPNE1-225ENST00000483495 IGHV3-30P01768 117 aa9.21□□□□□ -0.93
CPNE1-225ENST00000483495 IGHV3-30-5P0DP03 117 aa9.21□□□□□ -0.93
CPNE1-225ENST00000483495 C12orf74Q32Q52 190 aa9.21□□□□□ -0.93
CPNE1-225ENST00000483495 ZFAND6Q6FIF0 208 aa9.21□□□□□ -0.93
CPNE1-225ENST00000483495 IGLV4-60A0A075B6I1 120 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 TRAV26-1A0A087WT03 109 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 A0A1W2PPM0 123 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 K7ERJ3 54 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 FABP2P12104 132 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 SAMD5Q5TGI4 173 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 STAB1Q9NY15 2570 aa9.21□□□□□ -0.94
CPNE1-225ENST00000483495 A0A0J9YXY3 114 aa9.2□□□□□ -0.94
CPNE1-225ENST00000483495 NDUFA12Q9UI09 145 aa9.2□□□□□ -0.94
CPNE1-225ENST00000483495 DNAH3Q8TD57 4116 aa9.2□□□□□ -0.94
CPNE1-225ENST00000483495 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms