RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CLPSL2Q6UWE3 100 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 TPPP3Q9BW30 176 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 GNG13Q9P2W3 67 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.76
LRCH3-216ENST00000481048 IGLV10-54A0A075B6I4 117 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 PANO1I0J062 215 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 MT1HL1P0DM35 61 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 RPS10P46783 165 aaKnown RBP4.08□□□□□ -1.76
LRCH3-216ENST00000481048 AMTP48728 403 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 SULT1A2P50226 295 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
LRCH3-216ENST00000481048 NKX2-5P52952 324 aaPredicted RBP4.08□□□□□ -1.76
LRCH3-216ENST00000481048 MEF2BQ02080 365 aaPredicted RBP4.08□□□□□ -1.76
LRCH3-216ENST00000481048 CENPWQ5EE01 88 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 TEX261Q6UWH6 196 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 LYZL1Q6UWQ5 148 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 SPACA4Q8TDM5 124 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 C7orf33Q8WU49 177 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 CNFNQ9BYD5 112 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 PKIGQ9Y2B9 76 aa4.08□□□□□ -1.76
LRCH3-216ENST00000481048 hCG_2014768A0A024R1R8 64 aa4.07□□□□□ -1.76
LRCH3-216ENST00000481048 SMLR1H3BR10 107 aa4.07□□□□□ -1.76
LRCH3-216ENST00000481048 NDUFS6O75380 124 aaKnown RBP4.07□□□□□ -1.76
LRCH3-216ENST00000481048 MED9Q9NWA0 146 aa4.07□□□□□ -1.76
LRCH3-216ENST00000481048 LINC00474Q9P2X8 69 aa4.07□□□□□ -1.76
LRCH3-216ENST00000481048 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 RAB19A4D1S5 217 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 ZNF25P17030 456 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-216ENST00000481048 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 CTRLP40313 264 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 SMIM15Q7Z3B0 74 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 C15orf56Q8N910 161 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 GATD1Q8NB37 220 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
LRCH3-216ENST00000481048 TRBV20OR9-2A0A075B6H5 130 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-216ENST00000481048 PHOX2AO14813 284 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 BCL2P10415 239 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 COX6A2Q02221 97 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 OR5A1Q8NGJ0 315 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 CHCHD10Q8WYQ3 142 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-216ENST00000481048 LINC01600Q96MT4 127 aa4.05□□□□□ -1.76
LRCH3-216ENST00000481048 RPP21Q9H633 154 aaKnown RBP4.05□□□□□ -1.76
LRCH3-216ENST00000481048 TRBV6-5A0A0K0K1A5 114 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 A8MWL6 223 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 APCSP02743 223 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 CHTF8P0CG12 524 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-216ENST00000481048 MAJINQ3KP22 176 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 SLC51BQ86UW2 128 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 STPG4Q8N801 248 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 OCC1Q8TAD7 63 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 BTF3L4Q96K17 158 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
LRCH3-216ENST00000481048 IGHV1-58A0A0C4DH39 117 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 IGKV3OR2-268A0A0C4DH90 116 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 TMEM250H0YL14 139 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 I3L3M4 83 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 CCL25O15444 150 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 FGF6P10767 208 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 PMCHP20382 165 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 RNASEKQ6P5S7 137 aaKnown RBP4.03□□□□□ -1.76
LRCH3-216ENST00000481048 REG3GQ6UW15 175 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 SPINK6Q6UWN8 80 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 FAM231DQ6ZW35 169 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 GTSF1Q8WW33 167 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
LRCH3-216ENST00000481048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-216ENST00000481048 TRAV26-2A0A0B4J265 109 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 IGKV2-24A0A0C4DH68 120 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 A0A0J9YXV3 536 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 LINC00959A0A1B0GUT2 108 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 IGKV2-29A2NJV5 120 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-216ENST00000481048 FAM231BA6NCW3 169 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 K7EN84 100 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 ESDP10768 282 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
LRCH3-216ENST00000481048 SMAGPQ0VAQ4 97 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 SS18Q15532 418 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 Q6ZRP5 223 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 MRPL52Q86TS9 123 aaKnown RBP4.02□□□□□ -1.77
LRCH3-216ENST00000481048 ISOC2Q96AB3 205 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 BORCS7Q96B45 105 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 RPL39LQ96EH5 51 aaKnown RBP4.02□□□□□ -1.77
LRCH3-216ENST00000481048 MRAP2Q96G30 205 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 RNASE7Q9H1E1 156 aaKnown RBP4.02□□□□□ -1.77
LRCH3-216ENST00000481048 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
LRCH3-216ENST00000481048 A0A096LNI7 61 aa4.01□□□□□ -1.77
LRCH3-216ENST00000481048 TRBV27A0A0K0K1C4 114 aa4.01□□□□□ -1.77
LRCH3-216ENST00000481048 GATCO43716 136 aaKnown RBP4.01□□□□□ -1.77
LRCH3-216ENST00000481048 PPP1R17O96001 155 aa4.01□□□□□ -1.77
LRCH3-216ENST00000481048 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
LRCH3-216ENST00000481048 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
LRCH3-216ENST00000481048 SRSF9Q13242 221 aaKnown RBP eCLIP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 237.9 ms