RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 LRRC75A-AS1Q8N1F1 130 aa7.79□□□□□ -1.16
VPS52-217ENST00000478934 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
VPS52-217ENST00000478934 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
VPS52-217ENST00000478934 VWFP04275 2813 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 CCL24O00175 119 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 FASNP49327 2511 aaKnown RBP7.78□□□□□ -1.16
VPS52-217ENST00000478934 Q6ZTI0 123 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 STHQ8IWL8 128 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 LITAFQ99732 161 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 NDUFA12Q9UI09 145 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 UNC79Q9P2D8 2635 aa7.78□□□□□ -1.16
VPS52-217ENST00000478934 FN1P02751 2386 aaKnown RBP7.78□□□□□ -1.16
VPS52-217ENST00000478934 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
VPS52-217ENST00000478934 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.17
VPS52-217ENST00000478934 GCN1Q92616 2671 aaKnown RBP7.77□□□□□ -1.17
VPS52-217ENST00000478934 XGP55808 180 aa7.77□□□□□ -1.17
VPS52-217ENST00000478934 TEN1Q86WV5 123 aa7.77□□□□□ -1.17
VPS52-217ENST00000478934 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
VPS52-217ENST00000478934 PYGO1Q9Y3Y4 419 aa7.77□□□□□ -1.17
VPS52-217ENST00000478934 SLC25A20O43772 301 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 COX6A2Q02221 97 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 HECTD1Q9ULT8 2610 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 RS1O15537 224 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 TRIAP1O43715 76 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 BEAN1Q3B7T3 259 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 EDA2RQ9HAV5 297 aa7.76□□□□□ -1.17
VPS52-217ENST00000478934 IGHV1-58A0A0C4DH39 117 aa7.75□□□□□ -1.17
VPS52-217ENST00000478934 RPL35AP18077 110 aaKnown RBP7.75□□□□□ -1.17
VPS52-217ENST00000478934 TRBV20-1A0A075B6N2 111 aa7.75□□□□□ -1.17
VPS52-217ENST00000478934 KRTAP1-1Q07627 177 aa7.75□□□□□ -1.17
VPS52-217ENST00000478934 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
VPS52-217ENST00000478934 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
VPS52-217ENST00000478934 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
VPS52-217ENST00000478934 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
VPS52-217ENST00000478934 LINC01006Q8NI28 216 aa7.74□□□□□ -1.17
VPS52-217ENST00000478934 PPDPFLQ8WWR9 84 aa7.74□□□□□ -1.17
VPS52-217ENST00000478934 CLEC2BQ92478 149 aa7.74□□□□□ -1.17
VPS52-217ENST00000478934 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
VPS52-217ENST00000478934 YAE1D1Q9NRH1 226 aa7.74□□□□□ -1.17
VPS52-217ENST00000478934 SMR3AQ99954 134 aa7.74□□□□□ -1.17
VPS52-217ENST00000478934 LOC100131303A0A0U1RQF7 123 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 GAGE12JA6NER3 117 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 GAGE4Q13068 117 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 GAGE5Q13069 117 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 NTM-AS1Q6ZSK4 140 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 ATP6V0E2Q8NHE4 81 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 TRAV13-1A0A0B4J241 112 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
VPS52-217ENST00000478934 NTN5Q8WTR8 489 aaPredicted RBP7.73□□□□□ -1.17
VPS52-217ENST00000478934 TINCRA0A1B0GVN0 87 aa7.72□□□□□ -1.17
VPS52-217ENST00000478934 TMEM101Q96IK0 257 aa7.72□□□□□ -1.17
VPS52-217ENST00000478934 SPANXA1Q9NS26 97 aa7.72□□□□□ -1.17
VPS52-217ENST00000478934 SBSPONQ8IVN8 264 aa7.71□□□□□ -1.17
VPS52-217ENST00000478934 TMEM86BQ8N661 226 aa7.71□□□□□ -1.17
VPS52-217ENST00000478934 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.71□□□□□ -1.18
VPS52-217ENST00000478934 GAGE7O76087 117 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 GAGE12FP0CL80 117 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 GAGE12GP0CL81 117 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 GAGE12IP0CL82 117 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 CKS1BP61024 79 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 LINC01620Q4KN68 170 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 IL17DQ8TAD2 202 aa7.71□□□□□ -1.18
VPS52-217ENST00000478934 TENM1Q9UKZ4 2725 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 MIAQ16674 131 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 ICOSQ9Y6W8 199 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 CRYBA4P53673 196 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 DNAJC30Q96LL9 226 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 Q9H8V8 135 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
VPS52-217ENST00000478934 IGKV3OR2-268A0A0C4DH90 116 aa7.69□□□□□ -1.18
VPS52-217ENST00000478934 ATXN8Q156A1 80 aa7.69□□□□□ -1.18
VPS52-217ENST00000478934 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
VPS52-217ENST00000478934 PLAC8L1A1L4L8 177 aa7.69□□□□□ -1.18
VPS52-217ENST00000478934 SCGB1A1P11684 91 aa7.69□□□□□ -1.18
VPS52-217ENST00000478934 RPL13AP40429 203 aaKnown RBP7.69□□□□□ -1.18
VPS52-217ENST00000478934 ZFAND6Q6FIF0 208 aa7.69□□□□□ -1.18
VPS52-217ENST00000478934 TRAV25A0A0B4J276 109 aa7.68□□□□□ -1.18
VPS52-217ENST00000478934 K7EQD1 137 aa7.68□□□□□ -1.18
VPS52-217ENST00000478934 CIDEAO60543 219 aa7.68□□□□□ -1.18
VPS52-217ENST00000478934 C19orf73Q9NVV2 129 aa7.68□□□□□ -1.18
VPS52-217ENST00000478934 SPANXDQ9BXN6 97 aa7.67□□□□□ -1.18
VPS52-217ENST00000478934 SPANXCQ9NY87 97 aa7.67□□□□□ -1.18
VPS52-217ENST00000478934 TRGV2A0A075B6R0 118 aa7.67□□□□□ -1.18
VPS52-217ENST00000478934 TRBV30A0A0K0K1B3 111 aa7.67□□□□□ -1.18
VPS52-217ENST00000478934 CRLF1O75462 422 aa7.67□□□□□ -1.18
VPS52-217ENST00000478934 RPL36AP83881 106 aaKnown RBP7.67□□□□□ -1.18
VPS52-217ENST00000478934 RPL36ALQ969Q0 106 aaKnown RBP7.67□□□□□ -1.18
VPS52-217ENST00000478934 A0A1B0GV72 72 aa7.66□□□□□ -1.18
VPS52-217ENST00000478934 H7C423 109 aa7.66□□□□□ -1.18
VPS52-217ENST00000478934 KRTAP10-3P60369 221 aa7.66□□□□□ -1.18
VPS52-217ENST00000478934 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
VPS52-217ENST00000478934 CLUHP3Q96NS8 147 aa7.66□□□□□ -1.18
VPS52-217ENST00000478934 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
VPS52-217ENST00000478934 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms