RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 LITAFQ99732 161 aa13.24□□□□□ -0.29
PDE8A-204ENST00000478717 CSDC2Q9Y534 153 aaKnown RBP13.24□□□□□ -0.29
PDE8A-204ENST00000478717 I3L3M4 83 aa13.24□□□□□ -0.29
PDE8A-204ENST00000478717 SMCR5Q8TEV8 140 aa13.24□□□□□ -0.29
PDE8A-204ENST00000478717 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
PDE8A-204ENST00000478717 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
PDE8A-204ENST00000478717 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
PDE8A-204ENST00000478717 TRBV7-7A0A0K0K1E9 115 aa13.23□□□□□ -0.29
PDE8A-204ENST00000478717 TMEM101Q96IK0 257 aa13.23□□□□□ -0.29
PDE8A-204ENST00000478717 Q96MF0 132 aa13.23□□□□□ -0.29
PDE8A-204ENST00000478717 M0QY20 66 aa13.22□□□□□ -0.29
PDE8A-204ENST00000478717 DEFB131AP59861 70 aa13.22□□□□□ -0.29
PDE8A-204ENST00000478717 KHDC1LQ5JSQ8 128 aa13.22□□□□□ -0.29
PDE8A-204ENST00000478717 DEFB113Q30KQ7 82 aa13.22□□□□□ -0.29
PDE8A-204ENST00000478717 LINC01600Q96MT4 127 aa13.21□□□□□ -0.29
PDE8A-204ENST00000478717 IGHV3-73A0A0B4J1V6 119 aa13.21□□□□□ -0.29
PDE8A-204ENST00000478717 H3BT86 120 aa13.21□□□□□ -0.29
PDE8A-204ENST00000478717 COX6CP09669 75 aa13.21□□□□□ -0.29
PDE8A-204ENST00000478717 CHD6Q8TD26 2715 aa13.21□□□□□ -0.3
PDE8A-204ENST00000478717 TRBV27A0A0K0K1C4 114 aa13.2□□□□□ -0.3
PDE8A-204ENST00000478717 HERVK_113P63121 156 aa13.2□□□□□ -0.3
PDE8A-204ENST00000478717 CCDC168Q8NDH2 2452 aa13.2□□□□□ -0.3
PDE8A-204ENST00000478717 LST1O00453 97 aa13.19□□□□□ -0.3
PDE8A-204ENST00000478717 NDUFA7O95182 113 aa13.19□□□□□ -0.3
PDE8A-204ENST00000478717 RNF152Q8N8N0 203 aa13.19□□□□□ -0.3
PDE8A-204ENST00000478717 TIMM21Q9BVV7 248 aa13.19□□□□□ -0.3
PDE8A-204ENST00000478717 SPANXA1Q9NS26 97 aa13.19□□□□□ -0.3
PDE8A-204ENST00000478717 PROK1P58294 105 aa13.18□□□□□ -0.3
PDE8A-204ENST00000478717 TMEM61Q8N0U2 210 aa13.18□□□□□ -0.3
PDE8A-204ENST00000478717 C3orf22Q8N5N4 141 aa13.18□□□□□ -0.3
PDE8A-204ENST00000478717 WNK1Q9H4A3 2382 aa13.18□□□□□ -0.3
PDE8A-204ENST00000478717 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
PDE8A-204ENST00000478717 FAM240AA0A1B0GVK7 77 aa13.18□□□□□ -0.3
PDE8A-204ENST00000478717 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
PDE8A-204ENST00000478717 AKAP9Q99996 3911 aa13.17□□□□□ -0.3
PDE8A-204ENST00000478717 DNAJC30Q96LL9 226 aa13.17□□□□□ -0.3
PDE8A-204ENST00000478717 NDUFA12Q9UI09 145 aa13.17□□□□□ -0.3
PDE8A-204ENST00000478717 TRBV6-5A0A0K0K1A5 114 aa13.17□□□□□ -0.3
PDE8A-204ENST00000478717 A0A0U1RRA0 63 aa13.16□□□□□ -0.3
PDE8A-204ENST00000478717 RBMY1BA6NDE4 496 aaKnown RBP13.16□□□□□ -0.3
PDE8A-204ENST00000478717 RBMY1EA6NEQ0 496 aaKnown RBP13.16□□□□□ -0.3
PDE8A-204ENST00000478717 RBMY1DP0C7P1 496 aaKnown RBP13.16□□□□□ -0.3
PDE8A-204ENST00000478717 ITPR3Q14573 2671 aa13.16□□□□□ -0.3
PDE8A-204ENST00000478717 DEFB121Q5J5C9 76 aa13.16□□□□□ -0.3
PDE8A-204ENST00000478717 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
PDE8A-204ENST00000478717 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
PDE8A-204ENST00000478717 RS1O15537 224 aa13.15□□□□□ -0.3
PDE8A-204ENST00000478717 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
PDE8A-204ENST00000478717 Q9UF83 564 aa13.15□□□□□ -0.3
PDE8A-204ENST00000478717 EDA2RQ9HAV5 297 aa13.14□□□□□ -0.31
PDE8A-204ENST00000478717 NIPBLQ6KC79 2804 aaeCLIP13.13□□□□□ -0.31
PDE8A-204ENST00000478717 KRTAP1-3Q8IUG1 177 aa13.13□□□□□ -0.31
PDE8A-204ENST00000478717 Q8N2B8 174 aa13.13□□□□□ -0.31
PDE8A-204ENST00000478717 CYSTM1Q9H1C7 97 aa13.13□□□□□ -0.31
PDE8A-204ENST00000478717 MIAQ16674 131 aa13.12□□□□□ -0.31
PDE8A-204ENST00000478717 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
PDE8A-204ENST00000478717 CD28P10747 220 aa13.12□□□□□ -0.31
PDE8A-204ENST00000478717 RHOHQ15669 191 aa13.12□□□□□ -0.31
PDE8A-204ENST00000478717 HIST2H2BCQ6DN03 193 aa13.12□□□□□ -0.31
PDE8A-204ENST00000478717 NOTCH3Q9UM47 2321 aa13.11□□□□□ -0.31
PDE8A-204ENST00000478717 NSUN5P1Q3KNT7 163 aa13.11□□□□□ -0.31
PDE8A-204ENST00000478717 FAM104AQ969W3 186 aa13.11□□□□□ -0.31
PDE8A-204ENST00000478717 UQCRQO14949 82 aa13.11□□□□□ -0.31
PDE8A-204ENST00000478717 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
PDE8A-204ENST00000478717 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
PDE8A-204ENST00000478717 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
PDE8A-204ENST00000478717 FLNAP21333 2647 aaKnown RBP13.1□□□□□ -0.31
PDE8A-204ENST00000478717 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
PDE8A-204ENST00000478717 DYNLRB2Q8TF09 96 aa13.1□□□□□ -0.31
PDE8A-204ENST00000478717 C4orf3Q8WVX3 66 aa13.1□□□□□ -0.31
PDE8A-204ENST00000478717 CITED2Q99967 270 aaPredicted RBP13.1□□□□□ -0.31
PDE8A-204ENST00000478717 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 Q6ZSN1 163 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 LRRC75A-AS1Q8N1F1 130 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 LINC00526Q96FQ7 95 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 ACANP16112 2415 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 IGHV1-58A0A0C4DH39 117 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
PDE8A-204ENST00000478717 C5orf47Q569G3 176 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
PDE8A-204ENST00000478717 SPANXDQ9BXN6 97 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
PDE8A-204ENST00000478717 SPANXCQ9NY87 97 aa13.09□□□□□ -0.31
PDE8A-204ENST00000478717 hADV29S1A0JD25 119 aa13.08□□□□□ -0.32
PDE8A-204ENST00000478717 DEFB114Q30KQ6 69 aa13.08□□□□□ -0.32
PDE8A-204ENST00000478717 LINC00643Q86TS7 51 aa13.07□□□□□ -0.32
PDE8A-204ENST00000478717 VSIG2Q96IQ7 327 aa13.06□□□□□ -0.32
PDE8A-204ENST00000478717 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
PDE8A-204ENST00000478717 GAGE2AQ6NT46 116 aa13.06□□□□□ -0.32
PDE8A-204ENST00000478717 TENM4Q6N022 2769 aa13.06□□□□□ -0.32
PDE8A-204ENST00000478717 J3KT08 172 aa13.05□□□□□ -0.32
PDE8A-204ENST00000478717 KIR2DL5BQ8NHK3 375 aa13.05□□□□□ -0.32
PDE8A-204ENST00000478717 A8MTW9 85 aa13.05□□□□□ -0.32
PDE8A-204ENST00000478717 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
PDE8A-204ENST00000478717 XCL2Q9UBD3 114 aa13.04□□□□□ -0.32
PDE8A-204ENST00000478717 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
PDE8A-204ENST00000478717 TRAV13-1A0A0B4J241 112 aa13.04□□□□□ -0.32
PDE8A-204ENST00000478717 COX7CP15954 63 aa13.04□□□□□ -0.32
PDE8A-204ENST00000478717 C2orf48Q96LS8 159 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms