RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
SMARCE1-209ENST00000478349 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
SMARCE1-209ENST00000478349 C7orf77A4D0Y5 90 aa9.17□□□□□ -0.94
SMARCE1-209ENST00000478349 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-209ENST00000478349 LYPD6BQ8NI32 183 aa9.17□□□□□ -0.94
SMARCE1-209ENST00000478349 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
SMARCE1-209ENST00000478349 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 ZNF727A8MUV8 499 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 CCL25O15444 150 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 FCER1GP30273 86 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 FOXI1Q12951 378 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 RIGQ13278 110 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 ISOC2Q96AB3 205 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 OSTCQ9NRP0 149 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
SMARCE1-209ENST00000478349 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 PHOX2AO14813 284 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 TSHBP01222 138 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 ESDP10768 282 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 STPG4Q8N801 248 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 KIR2DL4Q99706 377 aa9.15□□□□□ -0.94
SMARCE1-209ENST00000478349 VCYO14598 125 aa9.14□□□□□ -0.95
SMARCE1-209ENST00000478349 CD164L2Q6UWJ8 174 aa9.14□□□□□ -0.95
SMARCE1-209ENST00000478349 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
SMARCE1-209ENST00000478349 PPP1R2P9O14990 202 aa9.13□□□□□ -0.95
SMARCE1-209ENST00000478349 TCAPO15273 167 aa9.13□□□□□ -0.95
SMARCE1-209ENST00000478349 MALP21145 153 aa9.13□□□□□ -0.95
SMARCE1-209ENST00000478349 FAM74A3Q4VXF1 159 aa9.13□□□□□ -0.95
SMARCE1-209ENST00000478349 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
SMARCE1-209ENST00000478349 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
SMARCE1-209ENST00000478349 C1orf196B1AJZ1 125 aa9.12□□□□□ -0.95
SMARCE1-209ENST00000478349 RAB4AP20338 218 aa9.12□□□□□ -0.95
SMARCE1-209ENST00000478349 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-209ENST00000478349 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
SMARCE1-209ENST00000478349 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
SMARCE1-209ENST00000478349 NAT8BQ9UHF3 227 aa9.12□□□□□ -0.95
SMARCE1-209ENST00000478349 hCG_2014768A0A024R1R8 64 aa9.11□□□□□ -0.95
SMARCE1-209ENST00000478349 SUMO2P61956 95 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-209ENST00000478349 PRR3P79522 188 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-209ENST00000478349 SYCNQ0VAF6 134 aa9.11□□□□□ -0.95
SMARCE1-209ENST00000478349 CSDC2Q9Y534 153 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-209ENST00000478349 A0A096LNI7 61 aa9.1□□□□□ -0.95
SMARCE1-209ENST00000478349 A0A1B0GW15 77 aa9.1□□□□□ -0.95
SMARCE1-209ENST00000478349 COX7A2LO14548 114 aa9.1□□□□□ -0.95
SMARCE1-209ENST00000478349 CAMPP49913 170 aa9.1□□□□□ -0.95
SMARCE1-209ENST00000478349 TMEM241Q24JQ0 296 aa9.1□□□□□ -0.95
SMARCE1-209ENST00000478349 APOMO95445 188 aa9.09□□□□□ -0.95
SMARCE1-209ENST00000478349 S100A8P05109 93 aa9.09□□□□□ -0.95
SMARCE1-209ENST00000478349 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-209ENST00000478349 V9GYV3 84 aa9.09□□□□□ -0.95
SMARCE1-209ENST00000478349 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
SMARCE1-209ENST00000478349 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
SMARCE1-209ENST00000478349 MT1HL1P0DM35 61 aa9.08□□□□□ -0.96
SMARCE1-209ENST00000478349 REG3GQ6UW15 175 aa9.08□□□□□ -0.96
SMARCE1-209ENST00000478349 NUP35Q8NFH5 326 aa9.08□□□□□ -0.96
SMARCE1-209ENST00000478349 IGLV4-69A0A075B6H9 119 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 ADIRFQ15847 76 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 Q6ZRP5 223 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 TIMM21Q9BVV7 248 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
SMARCE1-209ENST00000478349 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-209ENST00000478349 SPINK6Q6UWN8 80 aa9.06□□□□□ -0.96
SMARCE1-209ENST00000478349 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
SMARCE1-209ENST00000478349 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 F8W036 122 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 CKS2P33552 79 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 FAM104BQ5XKR9 115 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 NRACQ8N912 160 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 C2orf48Q96LS8 159 aa9.05□□□□□ -0.96
SMARCE1-209ENST00000478349 RPL23P62829 140 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-209ENST00000478349 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-209ENST00000478349 PEA15Q15121 130 aa9.04□□□□□ -0.96
SMARCE1-209ENST00000478349 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
SMARCE1-209ENST00000478349 SMDT1Q9H4I9 107 aa9.04□□□□□ -0.96
SMARCE1-209ENST00000478349 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
SMARCE1-209ENST00000478349 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
SMARCE1-209ENST00000478349 F8WDY8 70 aa9.03□□□□□ -0.96
SMARCE1-209ENST00000478349 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
SMARCE1-209ENST00000478349 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-209ENST00000478349 OR10D4PQ8NGN7 298 aa9.03□□□□□ -0.96
SMARCE1-209ENST00000478349 SPANXA1Q9NS26 97 aa9.03□□□□□ -0.96
SMARCE1-209ENST00000478349 TRBV24-1A0A075B6N3 115 aa9.02□□□□□ -0.97
SMARCE1-209ENST00000478349 PPBPP02775 128 aa9.02□□□□□ -0.97
SMARCE1-209ENST00000478349 HBBP68871 147 aa9.02□□□□□ -0.97
SMARCE1-209ENST00000478349 SPAG11BQ08648 103 aa9.02□□□□□ -0.97
SMARCE1-209ENST00000478349 Q6ZUT4 128 aa9.02□□□□□ -0.97
SMARCE1-209ENST00000478349 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
SMARCE1-209ENST00000478349 PKHD1L1Q86WI1 4243 aa9.01□□□□□ -0.97
SMARCE1-209ENST00000478349 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms