RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TXNDC17Q9BRA2 123 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 LIMD2Q9BT23 127 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 DHRS4-AS1Q9P1J3 65 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 FAM208BQ5VWN6 2430 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 CNOT1A5YKK6 2376 aaKnown RBP2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 ADAMTS9Q9P2N4 1935 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 NINQ8N4C6 2090 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 DOCK9Q9BZ29 2069 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV5-51A0A0C4DH38 117 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 A0A0J9YWU9 116 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 CYSRT1A8MQ03 144 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 TMEM14DPA8MWL7 114 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 F8WEM9 126 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 H7C423 109 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV1-46P01743 117 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 PRH1P02810 166 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 COX6CP09669 75 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 ZNF22P17026 224 aaPredicted RBP2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 MAPK1IP1LQ8NDC0 245 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 LINC01560Q8TB33 94 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 PROK2Q9HC23 129 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 ZNF355PQ9NSJ1 428 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 SDK1Q7Z5N4 2213 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 BAHCC1Q9P281 2608 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 NBEAQ8NFP9 2946 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 PLXNA2O75051 1894 aa2.31□□□□□ -2.04
FNDC3B-209ENST00000478016 CACNA1GO43497 2377 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 ATRXP46100 2492 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 DSPP15924 2871 aaKnown RBP2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 DMXL2Q8TDJ6 3036 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 IGLV3-21P80748 117 aaPredicted RBP2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 MOBPQ13875 183 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 NTM-AS1Q6ZSK4 140 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 KLF14Q8TD94 323 aaPredicted RBP2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 CDC42SE2Q9NRR3 84 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 DEC1Q9P2X7 70 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 S4R3C0 116 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 DOCK11Q5JSL3 2073 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 CACNA1EQ15878 2313 aa2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 ANKRD11Q6UB99 2663 aaPredicted RBP2.3□□□□□ -2.04
FNDC3B-209ENST00000478016 GCN1Q92616 2671 aaKnown RBP2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 CXorf51AA0A1B0GTR3 108 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 LHBP01229 141 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 IGKV1D-33P01593 117 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 IGKV1-33P01594 117 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 IFI6P09912 130 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 CAV3P56539 151 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 EIF4EBP1Q13541 118 aaPredicted RBP2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 GDF5OSQ5U4N7 250 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 Q6ZQT0 140 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 ZNF818PQ6ZRF7 136 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 LINC01006Q8NI28 216 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 ZNF563Q8TA94 476 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 TMEM14BQ9NUH8 114 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 PSENENQ9NZ42 101 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 GNG13Q9P2W3 67 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 C22orf24Q9Y442 160 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 FAM215AQ9Y5M1 114 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 IGSF10Q6WRI0 2623 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 ABCA7Q8IZY2 2146 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 MYOFQ9NZM1 2061 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 ANKRD36A6QL64 1941 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 CEP192Q8TEP8 1941 aa2.29□□□□□ -2.04
FNDC3B-209ENST00000478016 APC2O95996 2303 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 ASCC3Q8N3C0 2202 aaKnown RBP2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 BPTFQ12830 3046 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 IGLV3-16A0A075B6K0 115 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV1-3A0A0C4DH29 117 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 TRBV30A0A0K0K1B3 111 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 A6NIN4 97 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 C10orf142B7Z368 130 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 RTL8CO15255 209 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 DNAH10OSP0CZ25 163 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 Q6ZR03 302 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 ZCCHC23Q6ZST2 131 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 C1orf64Q8NEQ6 169 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 CIRBP-AS1Q8TBR5 109 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 PIKFYVEQ9Y2I7 2098 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 LRP4O75096 1905 aa2.28□□□□□ -2.04
FNDC3B-209ENST00000478016 SPENQ96T58 3664 aaKnown RBP2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 KALRNO60229 2985 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 IGLV11-55A0A075B6I3 123 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 TMSB15BA0A087X1C1 80 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 LOC107984156A0A0G2JMH3 177 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 TRBV7-4A0A0J9YYF1 115 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 LINC01549A6NIU2 74 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 A8MU10 97 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 WISP3O95389 354 aaPredicted RBP2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 CRPP02741 224 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 PRB1P04280 392 aa2.27□□□□□ -2.05
FNDC3B-209ENST00000478016 TLX1NBP0CAT3 122 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms