RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 TMEM101Q96IK0 257 aa14.57□□□□□ -0.08
SF1-214ENST00000477596 BTF3L4Q96K17 158 aa14.57□□□□□ -0.08
SF1-214ENST00000477596 GAGE12HA6NDE8 117 aa14.56□□□□□ -0.08
SF1-214ENST00000477596 RPL32P62910 135 aaKnown RBP14.56□□□□□ -0.08
SF1-214ENST00000477596 TMEM136Q6ZRR5 245 aa14.56□□□□□ -0.08
SF1-214ENST00000477596 PPBPP02775 128 aa14.55□□□□□ -0.08
SF1-214ENST00000477596 Q8N1X5 172 aa14.55□□□□□ -0.08
SF1-214ENST00000477596 CHCHD10Q8WYQ3 142 aaPredicted RBP14.55□□□□□ -0.08
SF1-214ENST00000477596 PRELID3AQ96N28 172 aa14.55□□□□□ -0.08
SF1-214ENST00000477596 CTDSP1Q9GZU7 261 aa14.54□□□□□ -0.08
SF1-214ENST00000477596 CDC42SE2Q9NRR3 84 aa14.54□□□□□ -0.08
SF1-214ENST00000477596 PHOX2AO14813 284 aa14.53□□□□□ -0.08
SF1-214ENST00000477596 TCAPO15273 167 aa14.53□□□□□ -0.08
SF1-214ENST00000477596 C10orf91Q5T1B1 145 aa14.53□□□□□ -0.08
SF1-214ENST00000477596 IMMP2LQ96T52 175 aa14.53□□□□□ -0.08
SF1-214ENST00000477596 UBE2D4Q9Y2X8 147 aa14.53□□□□□ -0.08
SF1-214ENST00000477596 RPL39P62891 51 aaKnown RBP14.52□□□□□ -0.09
SF1-214ENST00000477596 RNASE13Q5GAN3 156 aaKnown RBP14.52□□□□□ -0.09
SF1-214ENST00000477596 Q6ZSA8 131 aa14.51□□□□□ -0.09
SF1-214ENST00000477596 ZNF664Q8N3J9 261 aa14.51□□□□□ -0.09
SF1-214ENST00000477596 CARHSP1Q9Y2V2 147 aaKnown RBP14.51□□□□□ -0.09
SF1-214ENST00000477596 LINC00959A0A1B0GUT2 108 aa14.5□□□□□ -0.09
SF1-214ENST00000477596 XCL1P47992 114 aa14.5□□□□□ -0.09
SF1-214ENST00000477596 Q6ZUT4 128 aa14.5□□□□□ -0.09
SF1-214ENST00000477596 C15orf56Q8N910 161 aa14.5□□□□□ -0.09
SF1-214ENST00000477596 hDV102S1A0JD36 115 aa14.49□□□□□ -0.09
SF1-214ENST00000477596 CCL25O15444 150 aa14.49□□□□□ -0.09
SF1-214ENST00000477596 SMR3BP02814 79 aaPredicted RBP14.49□□□□□ -0.09
SF1-214ENST00000477596 FOXI1Q12951 378 aa14.49□□□□□ -0.09
SF1-214ENST00000477596 DGAT2L7PQ6IED9 249 aa14.49□□□□□ -0.09
SF1-214ENST00000477596 LOC389332A0A1B0GUA5 103 aa14.48□□□□□ -0.09
SF1-214ENST00000477596 CLRN3Q8NCR9 226 aa14.48□□□□□ -0.09
SF1-214ENST00000477596 CSDC2Q9Y534 153 aaKnown RBP14.47□□□□□ -0.09
SF1-214ENST00000477596 HIGD2BQ4VC39 106 aa14.46□□□□□ -0.09
SF1-214ENST00000477596 MAP1LC3AQ9H492 121 aa14.46□□□□□ -0.09
SF1-214ENST00000477596 LAMTOR2Q9Y2Q5 125 aa14.46□□□□□ -0.09
SF1-214ENST00000477596 TRAV9-1A0A075B6T8 112 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 SLPIP03973 132 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 KIAA1644Q3SXP7 199 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 FAM104AQ969W3 186 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 TMEM18Q96B42 140 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 OPRPNQ99935 248 aaPredicted RBP14.45□□□□□ -0.1
SF1-214ENST00000477596 TIMM21Q9BVV7 248 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 RPS10P5Q9NQ39 176 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 VPS13BQ7Z7G8 4022 aa14.45□□□□□ -0.1
SF1-214ENST00000477596 PRSS47A8MTI9 375 aa14.44□□□□□ -0.1
SF1-214ENST00000477596 RHEBQ15382 184 aa14.44□□□□□ -0.1
SF1-214ENST00000477596 S100PP25815 95 aa14.43□□□□□ -0.1
SF1-214ENST00000477596 SMAGPQ0VAQ4 97 aa14.43□□□□□ -0.1
SF1-214ENST00000477596 SS18Q15532 418 aa14.43□□□□□ -0.1
SF1-214ENST00000477596 SCXQ7RTU7 201 aa14.43□□□□□ -0.1
SF1-214ENST00000477596 C9orf163Q8N9P6 203 aa14.43□□□□□ -0.1
SF1-214ENST00000477596 TRAV13-1A0A0B4J241 112 aa14.42□□□□□ -0.1
SF1-214ENST00000477596 EPM2AB3EWF7 344 aa14.42□□□□□ -0.1
SF1-214ENST00000477596 RAB5AP20339 215 aa14.42□□□□□ -0.1
SF1-214ENST00000477596 CNBPP62633 177 aaKnown RBP14.42□□□□□ -0.1
SF1-214ENST00000477596 Q5VSD8 79 aa14.42□□□□□ -0.1
SF1-214ENST00000477596 Q8N8P6 123 aa14.41□□□□□ -0.1
SF1-214ENST00000477596 SPANXA1Q9NS26 97 aa14.41□□□□□ -0.1
SF1-214ENST00000477596 APOC3P02656 99 aa14.4□□□□□ -0.1
SF1-214ENST00000477596 CFAP161Q6P656 301 aa14.4□□□□□ -0.1
SF1-214ENST00000477596 CD164L2Q6UWJ8 174 aa14.4□□□□□ -0.1
SF1-214ENST00000477596 AP5S1Q9NUS5 200 aa14.4□□□□□ -0.1
SF1-214ENST00000477596 GVQW2A0A096LPI5 108 aaPredicted RBP14.39□□□□□ -0.11
SF1-214ENST00000477596 LINC00526Q96FQ7 95 aa14.38□□□□□ -0.11
SF1-214ENST00000477596 CHAC1Q9BUX1 264 aa14.38□□□□□ -0.11
SF1-214ENST00000477596 C1orf196B1AJZ1 125 aa14.37□□□□□ -0.11
SF1-214ENST00000477596 PANO1I0J062 215 aa14.37□□□□□ -0.11
SF1-214ENST00000477596 IFI27P40305 119 aaPredicted RBP14.37□□□□□ -0.11
SF1-214ENST00000477596 GNB1LQ9BYB4 327 aa14.37□□□□□ -0.11
SF1-214ENST00000477596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.37□□□□□ -0.11
SF1-214ENST00000477596 MRPS36P82909 103 aaKnown RBP14.36□□□□□ -0.11
SF1-214ENST00000477596 SDIM1Q6ZPB5 146 aa14.36□□□□□ -0.11
SF1-214ENST00000477596 CIRBP-AS1Q8TBR5 109 aa14.36□□□□□ -0.11
SF1-214ENST00000477596 TGIF2-C20orf24A0A0A6YYL0 155 aa14.35□□□□□ -0.11
SF1-214ENST00000477596 IGHV1-58A0A0C4DH39 117 aa14.35□□□□□ -0.11
SF1-214ENST00000477596 IGLV4-3A0A075B6K6 122 aa14.34□□□□□ -0.11
SF1-214ENST00000477596 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.34□□□□□ -0.11
SF1-214ENST00000477596 IFITM10A6NMD0 228 aa14.34□□□□□ -0.11
SF1-214ENST00000477596 C2orf66Q6UXQ4 117 aa14.34□□□□□ -0.11
SF1-214ENST00000477596 NXT2Q9NPJ8 142 aaKnown RBP14.34□□□□□ -0.11
SF1-214ENST00000477596 COX7A2LO14548 114 aa14.33□□□□□ -0.12
SF1-214ENST00000477596 NDUFA5Q16718 116 aa14.33□□□□□ -0.12
SF1-214ENST00000477596 C5orf38Q86SI9 138 aa14.33□□□□□ -0.12
SF1-214ENST00000477596 LINC00528Q8N1L1 170 aa14.33□□□□□ -0.12
SF1-214ENST00000477596 MRPL18Q9H0U6 180 aaKnown RBP14.33□□□□□ -0.12
SF1-214ENST00000477596 IGHV3-64A0A075B6Q5 118 aa14.32□□□□□ -0.12
SF1-214ENST00000477596 CHTF8P0CG12 524 aa14.32□□□□□ -0.12
SF1-214ENST00000477596 ORMDL2Q53FV1 153 aa14.32□□□□□ -0.12
SF1-214ENST00000477596 SVBPQ8N300 66 aa14.32□□□□□ -0.12
SF1-214ENST00000477596 ALKBH7Q9BT30 221 aaPredicted RBP14.32□□□□□ -0.12
SF1-214ENST00000477596 CYSLTR1Q9Y271 337 aa14.32□□□□□ -0.12
SF1-214ENST00000477596 PYGO1Q9Y3Y4 419 aa14.32□□□□□ -0.12
SF1-214ENST00000477596 SNAPINO95295 136 aa14.31□□□□□ -0.12
SF1-214ENST00000477596 ZC2HC1BQ5TFG8 222 aa14.31□□□□□ -0.12
SF1-214ENST00000477596 FAM229AH3BQW9 127 aa14.3□□□□□ -0.12
SF1-214ENST00000477596 MALP21145 153 aa14.3□□□□□ -0.12
SF1-214ENST00000477596 FABP9Q0Z7S8 132 aa14.3□□□□□ -0.12
SF1-214ENST00000477596 COX19Q49B96 90 aa14.3□□□□□ -0.12
SF1-214ENST00000477596 SRRM2Q9UQ35 2752 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms