RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 UQCRHP07919 91 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 PYYP10082 97 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 HIST1H1DP16402 221 aaKnown RBP0.7□□□□□ -2.3
SSB-210ENST00000474273 MPV17LQ2QL34 196 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 MEIG1Q5JSS6 88 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 LINC01545Q5VT33 79 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 C4orf33Q8N1A6 199 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 TCTEX1D1Q8N7M0 179 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 OR10AG1Q8NH19 301 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 TSLPQ969D9 159 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 SMIM7Q9BQ49 75 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 MRPL57Q9BQC6 102 aaKnown RBP0.7□□□□□ -2.3
SSB-210ENST00000474273 PROK2Q9HC23 129 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 SCN3BQ9NY72 215 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 NOP16Q9Y3C1 178 aaKnown RBP0.7□□□□□ -2.3
SSB-210ENST00000474273 C5orf42Q9H799 3197 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 NBASA2RRP1 2371 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 ROS1P08922 2347 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 AKAP6Q13023 2319 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 MAP1BP46821 2468 aaKnown RBP0.7□□□□□ -2.3
SSB-210ENST00000474273 SPTA1P02549 2419 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 USF3Q68DE3 2245 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 TRAV12-2A0A075B6T6 113 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 A0A0J9YY99 117 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 A0A1W2PRS3 328 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 FAM25AB3EWG3 89 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 FAM25CB3EWG5 89 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 FAM25GB3EWG6 89 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 ATP6V1G2-DDX39BF2Z307 99 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 J3QLW9 94 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 DNAL4O96015 105 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 IFNGP01579 166 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 RBP4P02753 201 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 SLC25A6P12236 298 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 IL7P13232 177 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 PDE6GP18545 87 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 S100A3P33764 101 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 LSM3P62310 102 aaKnown RBP0.69□□□□□ -2.3
SSB-210ENST00000474273 FAM74A1Q5RGS3 127 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 LYPD5Q6UWN5 251 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 SBSPONQ8IVN8 264 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 SEC11CQ9BY50 192 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 DPY30Q9C005 99 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 AGPAT4-IT1Q9H0P7 198 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 WFDC10AQ9H1F0 79 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 NDUFA12Q9UI09 145 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 BOKQ9UMX3 212 aaPredicted RBP0.69□□□□□ -2.3
SSB-210ENST00000474273 C22orf24Q9Y442 160 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 HIVEP3Q5T1R4 2406 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 SPTBN4Q9H254 2564 aa0.69□□□□□ -2.3
SSB-210ENST00000474273 ABCA1O95477 2261 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 GVINP1Q7Z2Y8 2422 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 CHD7Q9P2D1 2997 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 REV3LO60673 3130 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 HTTP42858 3142 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 UQCRHLA0A096LP55 91 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 TRAV17A0A0B4J275 112 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 NUPR2A6NF83 97 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 JMJD7-PLA2G4BH0Y9G9 81 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 H3BQF6 201 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 H3BRM9 83 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 CORTO00230 105 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 HMGN2P05204 90 aaKnown RBP0.68□□□□□ -2.3
SSB-210ENST00000474273 POLR2JP52435 117 aaKnown RBP0.68□□□□□ -2.3
SSB-210ENST00000474273 RPL38P63173 70 aaKnown RBP0.68□□□□□ -2.3
SSB-210ENST00000474273 GNGT1P63211 74 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 SLC48A1Q6P1K1 146 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 LINC00322Q6ZN03 302 aaPredicted RBP0.68□□□□□ -2.3
SSB-210ENST00000474273 IDO2Q6ZQW0 420 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 Q6ZS92 163 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 COMMD6Q7Z4G1 85 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 VSTM2AQ8TAG5 236 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 DYNLRB2Q8TF09 96 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 TSKUQ8WUA8 353 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 PRUNE2Q8WUY3 3088 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 C4orf3Q8WVX3 66 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 PP6455Q8WZ26 134 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 C14orf144Q96I85 54 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 PPP3R2Q96LZ3 170 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 PDCD10Q9BUL8 212 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 SAR1AQ9NR31 198 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 TAS2R8Q9NYW2 309 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 CCDC167Q9P0B6 97 aa0.68□□□□□ -2.3
SSB-210ENST00000474273 ZNF469Q96JG9 3925 aaPredicted RBP0.68□□□□□ -2.3
SSB-210ENST00000474273 NAV3Q8IVL0 2385 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 COL6A3P12111 3177 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 BDP1A6H8Y1 2624 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 A0A0G2JND7 137 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 NBDYA0A0U1RRE5 68 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 CPSF4LA6NMK7 179 aaKnown RBP0.67□□□□□ -2.3
SSB-210ENST00000474273 BBIP1A8MTZ0 92 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 F6UZH7 168 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 HMGN4O00479 90 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 IGHV3-30P01768 117 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 IGHV3-30-5P0DP03 117 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 COX6B1P14854 86 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 FGF7P21781 194 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 GUCA1AP43080 201 aaPredicted RBP0.67□□□□□ -2.3
SSB-210ENST00000474273 NPC2P61916 151 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 RHOHQ15669 191 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms