RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CKS2P33552 79 aa13.27□□□□□ -0.29
SNX13-206ENST00000474067 CAMPP49913 170 aa13.27□□□□□ -0.29
SNX13-206ENST00000474067 SS18Q15532 418 aa13.27□□□□□ -0.29
SNX13-206ENST00000474067 CHCHD10Q8WYQ3 142 aaPredicted RBP13.27□□□□□ -0.29
SNX13-206ENST00000474067 PPBPP02775 128 aa13.26□□□□□ -0.29
SNX13-206ENST00000474067 SRSF3P84103 164 aaKnown RBP13.26□□□□□ -0.29
SNX13-206ENST00000474067 CIRBP-AS1Q8TBR5 109 aa13.26□□□□□ -0.29
SNX13-206ENST00000474067 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
SNX13-206ENST00000474067 ATP5L2Q7Z4Y8 100 aa13.25□□□□□ -0.29
SNX13-206ENST00000474067 CSDC2Q9Y534 153 aaKnown RBP13.25□□□□□ -0.29
SNX13-206ENST00000474067 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
SNX13-206ENST00000474067 PHOX2AO14813 284 aa13.23□□□□□ -0.29
SNX13-206ENST00000474067 MRPL51Q4U2R6 128 aaKnown RBP13.23□□□□□ -0.29
SNX13-206ENST00000474067 ZNF664Q8N3J9 261 aa13.23□□□□□ -0.29
SNX13-206ENST00000474067 TRBV24-1A0A075B6N3 115 aa13.22□□□□□ -0.29
SNX13-206ENST00000474067 NRACQ8N912 160 aa13.22□□□□□ -0.29
SNX13-206ENST00000474067 ANAPC16Q96DE5 110 aa13.22□□□□□ -0.29
SNX13-206ENST00000474067 CDC42SE2Q9NRR3 84 aa13.22□□□□□ -0.29
SNX13-206ENST00000474067 LINC00959A0A1B0GUT2 108 aa13.21□□□□□ -0.29
SNX13-206ENST00000474067 SMKR1H3BMG3 65 aa13.21□□□□□ -0.29
SNX13-206ENST00000474067 GAS8-AS1O95177 125 aa13.21□□□□□ -0.29
SNX13-206ENST00000474067 MT-ND4LP03901 98 aa13.21□□□□□ -0.29
SNX13-206ENST00000474067 SDIM1Q6ZPB5 146 aa13.21□□□□□ -0.29
SNX13-206ENST00000474067 GVQW2A0A096LPI5 108 aaPredicted RBP13.2□□□□□ -0.3
SNX13-206ENST00000474067 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
SNX13-206ENST00000474067 C1orf196B1AJZ1 125 aa13.2□□□□□ -0.3
SNX13-206ENST00000474067 XCL1P47992 114 aa13.2□□□□□ -0.3
SNX13-206ENST00000474067 MRPL54Q6P161 138 aaKnown RBP13.2□□□□□ -0.3
SNX13-206ENST00000474067 DPH3Q96FX2 82 aa13.2□□□□□ -0.3
SNX13-206ENST00000474067 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
SNX13-206ENST00000474067 C15orf56Q8N910 161 aa13.19□□□□□ -0.3
SNX13-206ENST00000474067 TIMM21Q9BVV7 248 aa13.19□□□□□ -0.3
SNX13-206ENST00000474067 TNFRSF6BO95407 300 aa13.18□□□□□ -0.3
SNX13-206ENST00000474067 FOXI1Q12951 378 aa13.18□□□□□ -0.3
SNX13-206ENST00000474067 ORMDL3Q8N138 153 aa13.18□□□□□ -0.3
SNX13-206ENST00000474067 A0A1B0GXF2 115 aa13.17□□□□□ -0.3
SNX13-206ENST00000474067 D6R8Y8 96 aa13.17□□□□□ -0.3
SNX13-206ENST00000474067 SMIM2Q9BVW6 85 aa13.17□□□□□ -0.3
SNX13-206ENST00000474067 UBE2D4Q9Y2X8 147 aa13.17□□□□□ -0.3
SNX13-206ENST00000474067 ZNF561-AS1K7EIQ3 104 aa13.16□□□□□ -0.3
SNX13-206ENST00000474067 RAB5AP20339 215 aa13.16□□□□□ -0.3
SNX13-206ENST00000474067 MALP21145 153 aa13.16□□□□□ -0.3
SNX13-206ENST00000474067 LAMTOR2Q9Y2Q5 125 aa13.16□□□□□ -0.3
SNX13-206ENST00000474067 RPL37AP61513 92 aaKnown RBP13.15□□□□□ -0.3
SNX13-206ENST00000474067 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
SNX13-206ENST00000474067 HIGD2BQ4VC39 106 aa13.15□□□□□ -0.3
SNX13-206ENST00000474067 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
SNX13-206ENST00000474067 LINC00474Q9P2X8 69 aa13.15□□□□□ -0.3
SNX13-206ENST00000474067 J3QL48 77 aa13.14□□□□□ -0.31
SNX13-206ENST00000474067 APOMO95445 188 aa13.14□□□□□ -0.31
SNX13-206ENST00000474067 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
SNX13-206ENST00000474067 UQCC3Q6UW78 93 aa13.13□□□□□ -0.31
SNX13-206ENST00000474067 TMEM136Q6ZRR5 245 aa13.13□□□□□ -0.31
SNX13-206ENST00000474067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
SNX13-206ENST00000474067 COX7A2LO14548 114 aa13.12□□□□□ -0.31
SNX13-206ENST00000474067 SPACA4Q8TDM5 124 aa13.11□□□□□ -0.31
SNX13-206ENST00000474067 PRELID3AQ96N28 172 aa13.11□□□□□ -0.31
SNX13-206ENST00000474067 SLPIP03973 132 aa13.1□□□□□ -0.31
SNX13-206ENST00000474067 C7orf33Q8WU49 177 aa13.1□□□□□ -0.31
SNX13-206ENST00000474067 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
SNX13-206ENST00000474067 TRAV13-1A0A0B4J241 112 aa13.09□□□□□ -0.31
SNX13-206ENST00000474067 NPYP01303 97 aa13.09□□□□□ -0.31
SNX13-206ENST00000474067 IFI27P40305 119 aaPredicted RBP13.09□□□□□ -0.31
SNX13-206ENST00000474067 COX6A2Q02221 97 aa13.09□□□□□ -0.31
SNX13-206ENST00000474067 IMMP2LQ96T52 175 aa13.09□□□□□ -0.31
SNX13-206ENST00000474067 MAP1LC3AQ9H492 121 aa13.09□□□□□ -0.31
SNX13-206ENST00000474067 DNAH8Q96JB1 4490 aa13.09□□□□□ -0.31
SNX13-206ENST00000474067 FAT1Q14517 4588 aa13.08□□□□□ -0.32
SNX13-206ENST00000474067 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
SNX13-206ENST00000474067 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
SNX13-206ENST00000474067 A0A087WYN8 130 aa13.07□□□□□ -0.32
SNX13-206ENST00000474067 K7EMI3 77 aa13.07□□□□□ -0.32
SNX13-206ENST00000474067 SYCNQ0VAF6 134 aa13.07□□□□□ -0.32
SNX13-206ENST00000474067 Q6ZUT4 128 aa13.07□□□□□ -0.32
SNX13-206ENST00000474067 VPS13BQ7Z7G8 4022 aa13.07□□□□□ -0.32
SNX13-206ENST00000474067 PRSS47A8MTI9 375 aa13.06□□□□□ -0.32
SNX13-206ENST00000474067 G0S2P27469 103 aa13.06□□□□□ -0.32
SNX13-206ENST00000474067 CTDSP1Q9GZU7 261 aa13.06□□□□□ -0.32
SNX13-206ENST00000474067 PLAC8Q9NZF1 115 aa13.06□□□□□ -0.32
SNX13-206ENST00000474067 F8WDY8 70 aa13.05□□□□□ -0.32
SNX13-206ENST00000474067 OXTP01178 125 aa13.05□□□□□ -0.32
SNX13-206ENST00000474067 MAJINQ3KP22 176 aa13.05□□□□□ -0.32
SNX13-206ENST00000474067 IGLV4-69A0A075B6H9 119 aa13.04□□□□□ -0.32
SNX13-206ENST00000474067 C2orf48Q96LS8 159 aa13.04□□□□□ -0.32
SNX13-206ENST00000474067 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
SNX13-206ENST00000474067 SRRM2Q9UQ35 2752 aaKnown RBP13.04□□□□□ -0.32
SNX13-206ENST00000474067 TRAV9-1A0A075B6T8 112 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 IFITM10A6NMD0 228 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 PANO1I0J062 215 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 RPL39P62891 51 aaKnown RBP13.03□□□□□ -0.32
SNX13-206ENST00000474067 ORMDL2Q53FV1 153 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
SNX13-206ENST00000474067 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 CAMK2N2Q96S95 79 aa13.03□□□□□ -0.32
SNX13-206ENST00000474067 CHTF8P0CG12 524 aa13.02□□□□□ -0.33
SNX13-206ENST00000474067 S100PP25815 95 aa13.02□□□□□ -0.33
SNX13-206ENST00000474067 Q6ZN92 141 aa13.02□□□□□ -0.33
SNX13-206ENST00000474067 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms