RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MUC7Q8TAX7 377 aa7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 BAALCQ8WXS3 180 aa7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 TRAV12-1A0A0B4J245 112 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 IGKV3OR2-268A0A0C4DH90 116 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 LOC105371267A0A1B0GV96 52 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 IGIPA6NJ69 53 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 PLNP26678 52 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 SEC11AP67812 179 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 S100A12P80511 92 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 Q6ZUT4 128 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 ZNF664Q8N3J9 261 aa7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 MRPS16Q9Y3D3 137 aaKnown RBP7.09□□□□□ -1.27
PRPF38A-202ENST00000474048 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 A0A1B0GUV1 79 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 DPM2O94777 84 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 SMIM6P0DI80 62 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 RBX1P62877 108 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 ESRGQ1W209 222 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 MPV17L2Q567V2 206 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 LGALS9CQ6DKI2 356 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
PRPF38A-202ENST00000474048 PRSS29PA6NIE9 313 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 F8VRH5 84 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 SIVA1O15304 175 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 JOSD1Q15040 202 aaPredicted RBP7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 SS18Q15532 418 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 SPATA12Q7Z6I5 190 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 Q8N976 141 aa7.07□□□□□ -1.28
PRPF38A-202ENST00000474048 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 IGKCP01834 107 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 HERVK_113P61574 105 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 WFDC10BQ8IUB3 73 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 C10orf126Q8N4M7 172 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 CST9LQ9H4G1 147 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 APLNQ9ULZ1 77 aa7.06□□□□□ -1.28
PRPF38A-202ENST00000474048 H3BRM9 83 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 HERVK_113P63121 156 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 ODF1Q14990 250 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 CLPSL2Q6UWE3 100 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 PMCHL2Q9BQD1 86 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 VAMP8Q9BV40 100 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 KLK12Q9UKR0 248 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 LINC00588Q9Y4M8 146 aa7.05□□□□□ -1.28
PRPF38A-202ENST00000474048 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 C3orf84H3BNL1 204 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 CCL25O15444 150 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 REG3AQ06141 175 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 LINC01556Q5JQF7 62 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 TMEM170BQ5T4T1 132 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 LINC00269Q8N2A0 174 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 AMELXQ99217 191 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
PRPF38A-202ENST00000474048 TTC32Q5I0X7 151 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 ZC2HC1BQ5TFG8 222 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 LINC00469Q8N7U9 141 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 UBE2WQ96B02 151 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 RMI2Q96E14 147 aa7.03□□□□□ -1.28
PRPF38A-202ENST00000474048 A0A0J9YXV3 536 aa7.02□□□□□ -1.29
PRPF38A-202ENST00000474048 TINCRA0A1B0GVN0 87 aa7.02□□□□□ -1.29
PRPF38A-202ENST00000474048 K7EP13 123 aa7.02□□□□□ -1.29
PRPF38A-202ENST00000474048 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
PRPF38A-202ENST00000474048 UBE2D1P51668 147 aa7.02□□□□□ -1.29
PRPF38A-202ENST00000474048 Q9H8V8 135 aa7.02□□□□□ -1.29
PRPF38A-202ENST00000474048 STAB2Q8WWQ8 2551 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 IGLC3P0DOY3 106 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 MIAQ16674 131 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 C12orf57Q99622 126 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 C1orf43Q9BWL3 253 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
PRPF38A-202ENST00000474048 MALP21145 153 aa7□□□□□ -1.29
PRPF38A-202ENST00000474048 XCL1P47992 114 aa7□□□□□ -1.29
PRPF38A-202ENST00000474048 NFE4Q86UQ8 179 aa7□□□□□ -1.29
PRPF38A-202ENST00000474048 PAM16Q9Y3D7 125 aa7□□□□□ -1.29
PRPF38A-202ENST00000474048 IGLV4-69A0A075B6H9 119 aa6.99□□□□□ -1.29
PRPF38A-202ENST00000474048 IGLV10-54A0A075B6I4 117 aa6.99□□□□□ -1.29
PRPF38A-202ENST00000474048 C11orf86A6NJI1 115 aa6.99□□□□□ -1.29
PRPF38A-202ENST00000474048 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
PRPF38A-202ENST00000474048 Q8N3U1 123 aa6.99□□□□□ -1.29
PRPF38A-202ENST00000474048 Q9HAA7 133 aa6.99□□□□□ -1.29
PRPF38A-202ENST00000474048 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms