RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 URB1-AS1Q96HZ7 61 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 HIST1H2BLQ99880 126 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 GTSF1LQ9H1H1 148 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 CYSLTR1Q9Y271 337 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 TRAV10A0A0B4J240 114 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 GAGE12JA6NER3 117 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 NPSP0C0P6 89 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 P0DMU3 169 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 FAM231AP0DMU4 169 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 FAM231CP0DMU5 169 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 HTN3P15516 51 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 GAGE1Q13065 139 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 GAGE4Q13068 117 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 GAGE5Q13069 117 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 PDZD11Q5EBL8 140 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 ICOSQ9Y6W8 199 aa4.64□□□□□ -1.67
VAMP3-202ENST00000470357 TRBV25-1A0A075B6N4 114 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 H7C423 109 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 NUPR1O60356 82 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 TSHBP01222 138 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 LINC00694P0DN24 101 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 PKIAP61925 76 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 C2orf66Q6UXQ4 117 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 Q6ZTC4 211 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 ERASQ7Z444 233 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 FAM19A2Q8N3H0 131 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 ATP6V0E2Q8NHE4 81 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 TOMM6Q96B49 74 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 MAP1LC3CQ9BXW4 147 aa4.63□□□□□ -1.67
VAMP3-202ENST00000470357 LOC105371267A0A1B0GV96 52 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 C20orf202A1L168 122 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-202ENST00000470357 TIRAPP58753 221 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 NANOS2P60321 138 aaKnown RBP4.62□□□□□ -1.67
VAMP3-202ENST00000470357 ZFAND6Q6FIF0 208 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 DGAT2L7PQ6IED9 249 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 NEGR1Q7Z3B1 354 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 C15orf53Q8NAA6 179 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 C20orf203Q8NBC4 194 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 OR10D4PQ8NGN7 298 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 NTN5Q8WTR8 489 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-202ENST00000470357 PHLDA1Q8WV24 401 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-202ENST00000470357 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 TMEM141Q96I45 108 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 VSIG2Q96IQ7 327 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 SCGB3A1Q96QR1 104 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 TMEM243Q9BU79 118 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 SPANXA1Q9NS26 97 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 PYGO1Q9Y3Y4 419 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 COX11Q9Y6N1 276 aa4.62□□□□□ -1.67
VAMP3-202ENST00000470357 A0A096LNJ9 63 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 TRBV6-8A0A0A6YYG3 113 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 A0A0J9YY99 117 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 IFITM10A6NMD0 228 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 UBE2L6O14933 153 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 KRTDAPP60985 99 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 PMCHL1Q16048 86 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 PET117Q6UWS5 81 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 Q6ZN92 141 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 SPATA12Q7Z6I5 190 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 TIMM17AQ99595 171 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 Q9UF83 564 aa4.61□□□□□ -1.67
VAMP3-202ENST00000470357 ABCA13Q86UQ4 5058 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 LOC100131303A0A0U1RQF7 123 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 SYS1-DBNDD2H3BUS1 97 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 PRSS1P07477 247 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 SMIM6P0DI80 62 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 ZNF25P17030 456 aaPredicted RBP4.6□□□□□ -1.67
VAMP3-202ENST00000470357 AMMECR1LQ6DCA0 310 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 MRPL52Q86TS9 123 aaKnown RBP4.6□□□□□ -1.67
VAMP3-202ENST00000470357 TMEM101Q96IK0 257 aa4.6□□□□□ -1.67
VAMP3-202ENST00000470357 CSDC2Q9Y534 153 aaKnown RBP4.6□□□□□ -1.67
VAMP3-202ENST00000470357 VPS13DQ5THJ4 4388 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 A0A096LPF7 62 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 TRAV8-6A0A0B4J262 113 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 NUPR2A6NF83 97 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 IGIPA6NJ69 53 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 C3orf79P0CE67 100 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 TCTAP57738 103 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.67
VAMP3-202ENST00000470357 JOSD1Q15040 202 aaPredicted RBP4.59□□□□□ -1.67
VAMP3-202ENST00000470357 LELP1Q5T871 98 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 NTM-AS1Q6ZSK4 140 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 CHCHD5Q9BSY4 110 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 CHCHD7Q9BUK0 85 aa4.59□□□□□ -1.67
VAMP3-202ENST00000470357 KLK5Q9Y337 293 aaPredicted RBP4.59□□□□□ -1.67
VAMP3-202ENST00000470357 FGF6P10767 208 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 RPL39P62891 51 aaKnown RBP4.58□□□□□ -1.68
VAMP3-202ENST00000470357 PMVKQ15126 192 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 LGALS9CQ6DKI2 356 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 OR5A1Q8NGJ0 315 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 C2orf88Q9BSF0 95 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 VCX2Q9H322 139 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 UBE2D4Q9Y2X8 147 aa4.58□□□□□ -1.68
VAMP3-202ENST00000470357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms