RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 IGHV3-30-5P0DP03 117 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 HIST3H2BBQ8N257 126 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 OR4C5Q8NGB2 326 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 TRAV4A0A0B4J268 109 aa8.18□□□□□ -1.1
HDAC6-217ENST00000469223 TRGV4A0A0C4DH28 118 aa8.18□□□□□ -1.1
HDAC6-217ENST00000469223 AMTP48728 403 aa8.18□□□□□ -1.1
HDAC6-217ENST00000469223 AKR1D1P51857 326 aa8.18□□□□□ -1.1
HDAC6-217ENST00000469223 NIT1Q86X76 327 aa8.18□□□□□ -1.1
HDAC6-217ENST00000469223 ST20Q9HBF5 79 aa8.18□□□□□ -1.1
HDAC6-217ENST00000469223 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 NCR2O95944 276 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 NPYP01303 97 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 FABP4P15090 132 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
HDAC6-217ENST00000469223 LAGE3Q14657 143 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 IQCJQ1A5X6 159 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 BAALCQ8WXS3 180 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 KIR2DL4Q99706 377 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 KIF25-AS1Q9Y6Z4 181 aa8.17□□□□□ -1.1
HDAC6-217ENST00000469223 A0A0U1RQV1 116 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 LOC389332A0A1B0GUA5 103 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 LOC105371267A0A1B0GV96 52 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
HDAC6-217ENST00000469223 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 CFAP126Q5VTH2 177 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 SUMO4Q6EEV6 95 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 Q8N8P6 123 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 DNAJC30Q96LL9 226 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 NIT2Q9NQR4 276 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 HSPB8Q9UJY1 196 aa8.16□□□□□ -1.1
HDAC6-217ENST00000469223 TRAV26-2A0A0B4J265 109 aa8.15□□□□□ -1.1
HDAC6-217ENST00000469223 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
HDAC6-217ENST00000469223 VCYO14598 125 aa8.15□□□□□ -1.1
HDAC6-217ENST00000469223 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-217ENST00000469223 HIST1H2BLQ99880 126 aa8.15□□□□□ -1.1
HDAC6-217ENST00000469223 SMIM2Q9BVW6 85 aa8.15□□□□□ -1.1
HDAC6-217ENST00000469223 TRBV10-1A0A0K0K1A3 114 aa8.14□□□□□ -1.11
HDAC6-217ENST00000469223 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
HDAC6-217ENST00000469223 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-217ENST00000469223 SH2D6Q7Z4S9 175 aa8.14□□□□□ -1.11
HDAC6-217ENST00000469223 NRACQ8N912 160 aa8.14□□□□□ -1.11
HDAC6-217ENST00000469223 ZNF479Q96JC4 524 aa8.14□□□□□ -1.11
HDAC6-217ENST00000469223 JPT2Q9H910 190 aa8.14□□□□□ -1.11
HDAC6-217ENST00000469223 FSIP2Q5CZC0 6907 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 M0QY20 66 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 HBDP02042 147 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 FCER1GP30273 86 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 Q8N3U1 123 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 PRADC1Q9BSG0 188 aa8.13□□□□□ -1.11
HDAC6-217ENST00000469223 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
HDAC6-217ENST00000469223 TIRAPP58753 221 aa8.12□□□□□ -1.11
HDAC6-217ENST00000469223 RPL36AP83881 106 aaKnown RBP8.12□□□□□ -1.11
HDAC6-217ENST00000469223 OR10D4PQ8NGN7 298 aa8.12□□□□□ -1.11
HDAC6-217ENST00000469223 RPL36ALQ969Q0 106 aaKnown RBP8.12□□□□□ -1.11
HDAC6-217ENST00000469223 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
HDAC6-217ENST00000469223 IGHV3-73A0A0B4J1V6 119 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 C20orf202A1L168 122 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 SDHAF1A6NFY7 115 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 I3L3M4 83 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 SMIM6P0DI80 62 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 RHOHQ15669 191 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 Q8N976 141 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
HDAC6-217ENST00000469223 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
HDAC6-217ENST00000469223 IGHV1-24A0A0C4DH33 117 aa8.1□□□□□ -1.11
HDAC6-217ENST00000469223 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
HDAC6-217ENST00000469223 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-217ENST00000469223 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
HDAC6-217ENST00000469223 ATP6V0E2Q8NHE4 81 aa8.1□□□□□ -1.11
HDAC6-217ENST00000469223 NUPR1O60356 82 aa8.09□□□□□ -1.11
HDAC6-217ENST00000469223 ATP5LO75964 103 aa8.09□□□□□ -1.11
HDAC6-217ENST00000469223 LINC00310P59036 64 aa8.09□□□□□ -1.11
HDAC6-217ENST00000469223 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
HDAC6-217ENST00000469223 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
HDAC6-217ENST00000469223 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
HDAC6-217ENST00000469223 TRBV7-3A0A075B6L6 115 aa8.08□□□□□ -1.12
HDAC6-217ENST00000469223 TRAV8-3A0A0A6YYJ7 113 aa8.08□□□□□ -1.12
HDAC6-217ENST00000469223 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
HDAC6-217ENST00000469223 KRTDAPP60985 99 aa8.08□□□□□ -1.12
HDAC6-217ENST00000469223 TMEM97Q5BJF2 176 aa8.08□□□□□ -1.12
HDAC6-217ENST00000469223 CYSLTR1Q9Y271 337 aa8.08□□□□□ -1.12
HDAC6-217ENST00000469223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-217ENST00000469223 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
HDAC6-217ENST00000469223 PANO1I0J062 215 aa8.07□□□□□ -1.12
HDAC6-217ENST00000469223 S100A12P80511 92 aa8.07□□□□□ -1.12
HDAC6-217ENST00000469223 COTL1Q14019 142 aa8.07□□□□□ -1.12
HDAC6-217ENST00000469223 URB1-AS1Q96HZ7 61 aa8.07□□□□□ -1.12
HDAC6-217ENST00000469223 A0A0J9YXV3 536 aa8.06□□□□□ -1.12
HDAC6-217ENST00000469223 SCGB1D1O95968 90 aa8.06□□□□□ -1.12
HDAC6-217ENST00000469223 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
HDAC6-217ENST00000469223 SLC25A29Q8N8R3 303 aa8.06□□□□□ -1.12
HDAC6-217ENST00000469223 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms