RNA–Protein interactions for RNA: ENST00000467915.1

SGSM3-206, Transcript of small G protein signaling modulator 3, human

TSL 3

Gene SGSM3, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-206	ENST00000467915		A0A1B0GXF2	115 aa		10.05	□□□□□ -0.8
SGSM3-206	ENST00000467915		H7C1H1	209 aa		10.05	□□□□□ -0.8
SGSM3-206	ENST00000467915	CHTF8	P0CG12	524 aa		10.05	□□□□□ -0.8
SGSM3-206	ENST00000467915	CNBP	P62633	177 aa	Known RBP	10.05	□□□□□ -0.8
SGSM3-206	ENST00000467915	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915		A0A1B0GUV1	79 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	MT1HL1	P0DM35	61 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	RAB4A	P20338	218 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	CIRBP	Q14011	172 aa	Known RBP	10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	COX19	Q49B96	90 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	FAM104B	Q5XKR9	115 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	CBLN2	Q8IUK8	224 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	AMN1	Q8IY45	258 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	NIT2	Q9NQR4	276 aa		10.04	□□□□□ -0.8
SGSM3-206	ENST00000467915	PLA2G2D	Q9UNK4	145 aa		10.03	□□□□□ -0.8
SGSM3-206	ENST00000467915	TRAV8-4	A0A0B4J246	113 aa		10.02	□□□□□ -0.81
SGSM3-206	ENST00000467915	RNF185	Q96GF1	192 aa		10.02	□□□□□ -0.81
SGSM3-206	ENST00000467915	TRBV24-1	A0A075B6N3	115 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915		A0A087WYN8	130 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	TRAV26-2	A0A0B4J265	109 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	SCO1	O75880	301 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	CKS2	P33552	79 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	AMT	P48728	403 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	MRPL51	Q4U2R6	128 aa	Known RBP	10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	GATD1	Q8NB37	220 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	MRAP2	Q96G30	205 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	GNB1L	Q9BYB4	327 aa		10.01	□□□□□ -0.81
SGSM3-206	ENST00000467915	IGHV3-64	A0A075B6Q5	118 aa		10	□□□□□ -0.81
SGSM3-206	ENST00000467915	IGKV3OR2-268	A0A0C4DH90	116 aa		10	□□□□□ -0.81
SGSM3-206	ENST00000467915	APCS	P02743	223 aa		10	□□□□□ -0.81
SGSM3-206	ENST00000467915	TMEM136	Q6ZRR5	245 aa		10	□□□□□ -0.81
SGSM3-206	ENST00000467915	C15orf56	Q8N910	161 aa		10	□□□□□ -0.81
SGSM3-206	ENST00000467915	GAGE12H	A6NDE8	117 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	UBE2L6	O14933	153 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	PPP1R17	O96001	155 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	COTL1	Q14019	142 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	SPACA4	Q8TDM5	124 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	DPH3	Q96FX2	82 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	AP5S1	Q9NUS5	200 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	TRAPPC1	Q9Y5R8	145 aa		9.99	□□□□□ -0.81
SGSM3-206	ENST00000467915	TNXB	P22105	4242 aa		9.98	□□□□□ -0.81
SGSM3-206	ENST00000467915	SMKR1	H3BMG3	65 aa		9.98	□□□□□ -0.81
SGSM3-206	ENST00000467915	PPBP	P02775	128 aa		9.98	□□□□□ -0.81
SGSM3-206	ENST00000467915	MT-ND6	P03923	174 aa		9.98	□□□□□ -0.81
SGSM3-206	ENST00000467915	FABP9	Q0Z7S8	132 aa		9.98	□□□□□ -0.81
SGSM3-206	ENST00000467915	RPL39L	Q96EH5	51 aa	Known RBP	9.98	□□□□□ -0.81
SGSM3-206	ENST00000467915		D6R8Y8	96 aa		9.97	□□□□□ -0.81
SGSM3-206	ENST00000467915	NCR2	O95944	276 aa		9.97	□□□□□ -0.81
SGSM3-206	ENST00000467915	HIGD2B	Q4VC39	106 aa		9.97	□□□□□ -0.81
SGSM3-206	ENST00000467915	ORMDL3	Q8N138	153 aa		9.97	□□□□□ -0.81
SGSM3-206	ENST00000467915	YPEL4	Q96NS1	127 aa		9.97	□□□□□ -0.81
SGSM3-206	ENST00000467915	MRPL18	Q9H0U6	180 aa	Known RBP	9.97	□□□□□ -0.81
SGSM3-206	ENST00000467915	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	IGKV2-29	A2NJV5	120 aa	Predicted RBP	9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	GAS8-AS1	O95177	125 aa		9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	COX6A2	Q02221	97 aa		9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	KIAA1644	Q3SXP7	199 aa		9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915		Q6ZRU5	148 aa		9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	PRELID3A	Q96N28	172 aa		9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	ST20	Q9HBF5	79 aa		9.96	□□□□□ -0.82
SGSM3-206	ENST00000467915	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	9.95	□□□□□ -0.82
SGSM3-206	ENST00000467915	COLCA2	A8K830	154 aa		9.95	□□□□□ -0.82
SGSM3-206	ENST00000467915	RPS10	P46783	165 aa	Known RBP	9.95	□□□□□ -0.82
SGSM3-206	ENST00000467915	PRSS3P2	Q8NHM4	247 aa		9.95	□□□□□ -0.82
SGSM3-206	ENST00000467915	PLAC8	Q9NZF1	115 aa		9.95	□□□□□ -0.82
SGSM3-206	ENST00000467915	PHOX2A	O14813	284 aa		9.94	□□□□□ -0.82
SGSM3-206	ENST00000467915	TNFRSF6B	O95407	300 aa		9.94	□□□□□ -0.82
SGSM3-206	ENST00000467915	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	9.94	□□□□□ -0.82
SGSM3-206	ENST00000467915	PMCH	P20382	165 aa		9.93	□□□□□ -0.82
SGSM3-206	ENST00000467915	RNASEK	Q6P5S7	137 aa	Known RBP	9.93	□□□□□ -0.82
SGSM3-206	ENST00000467915	TRBV6-5	A0A0K0K1A5	114 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	SDHAF1	A6NFY7	115 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	NPY	P01303	97 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	RAB5A	P20339	215 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	SUMO2	P61956	95 aa	Known RBP	9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	AMMECR1L	Q6DCA0	310 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	CFAP161	Q6P656	301 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	NRAC	Q8N912	160 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	LAMTOR2	Q9Y2Q5	125 aa		9.92	□□□□□ -0.82
SGSM3-206	ENST00000467915	IGKV2-24	A0A0C4DH68	120 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	LOC389332	A0A1B0GUA5	103 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915		I3L3M4	83 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	VCY	O14598	125 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	FGF6	P10767	208 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	FOXI1	Q12951	378 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	MAJIN	Q3KP22	176 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	C20orf78	Q9BR46	151 aa		9.91	□□□□□ -0.82
SGSM3-206	ENST00000467915	ODF1	Q14990	250 aa		9.9	□□□□□ -0.82
SGSM3-206	ENST00000467915	LINC00526	Q96FQ7	95 aa		9.9	□□□□□ -0.82
SGSM3-206	ENST00000467915	MAP1LC3A	Q9H492	121 aa		9.9	□□□□□ -0.82
SGSM3-206	ENST00000467915	GVQW2	A0A096LPI5	108 aa	Predicted RBP	9.89	□□□□□ -0.83
SGSM3-206	ENST00000467915	POLR2K	P53803	58 aa	Known RBP	9.89	□□□□□ -0.83
SGSM3-206	ENST00000467915	KIR2DL4	Q99706	377 aa		9.89	□□□□□ -0.83
SGSM3-206	ENST00000467915	ALKBH7	Q9BT30	221 aa	Predicted RBP	9.89	□□□□□ -0.83
SGSM3-206	ENST00000467915		A0A096LNI7	61 aa		9.88	□□□□□ -0.83
SGSM3-206	ENST00000467915	TRGC2	P03986	189 aa		9.88	□□□□□ -0.83
SGSM3-206	ENST00000467915	FCER1G	P30273	86 aa		9.88	□□□□□ -0.83
SGSM3-206	ENST00000467915	XCL1	P47992	114 aa		9.88	□□□□□ -0.83
SGSM3-206	ENST00000467915	STPG4	Q8N801	248 aa		9.88	□□□□□ -0.83
SGSM3-206	ENST00000467915	LRP2	P98164	4655 aa		9.88	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms