RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 COX6B1P14854 86 aa-1.56□□□□□ -2.66
SMC4-207ENST00000467263 ALX1Q15699 326 aa-1.56□□□□□ -2.66
SMC4-207ENST00000467263 DOCK1Q14185 1865 aa-1.56□□□□□ -2.66
SMC4-207ENST00000467263 PKHD1P08F94 4074 aa-1.56□□□□□ -2.66
SMC4-207ENST00000467263 WDR7Q9Y4E6 1490 aa-1.56□□□□□ -2.66
SMC4-207ENST00000467263 SETD2Q9BYW2 2564 aaPredicted RBP-1.56□□□□□ -2.66
SMC4-207ENST00000467263 KCNRGQ8N5I3 272 aa-1.57□□□□□ -2.66
SMC4-207ENST00000467263 AQP10Q96PS8 301 aa-1.57□□□□□ -2.66
SMC4-207ENST00000467263 SDF2Q99470 211 aa-1.57□□□□□ -2.66
SMC4-207ENST00000467263 V9GYH0 126 aa-1.57□□□□□ -2.66
SMC4-207ENST00000467263 ZNF518AQ6AHZ1 1483 aa-1.57□□□□□ -2.66
SMC4-207ENST00000467263 TRAV13-2A0A0B4J235 113 aa-1.58□□□□□ -2.66
SMC4-207ENST00000467263 GUCA1AP43080 201 aaPredicted RBP-1.58□□□□□ -2.66
SMC4-207ENST00000467263 FHAD1B1AJZ9 1412 aa-1.58□□□□□ -2.66
SMC4-207ENST00000467263 SPAARA0A1B0GVQ0 90 aa-1.59□□□□□ -2.66
SMC4-207ENST00000467263 TSTD1Q8NFU3 115 aa-1.59□□□□□ -2.66
SMC4-207ENST00000467263 FXYD6Q9H0Q3 95 aa-1.59□□□□□ -2.66
SMC4-207ENST00000467263 LINC00472Q9H8W2 130 aa-1.59□□□□□ -2.66
SMC4-207ENST00000467263 LENEPQ9Y5L5 61 aa-1.59□□□□□ -2.66
SMC4-207ENST00000467263 DNAJC13O75165 2243 aa-1.59□□□□□ -2.66
SMC4-207ENST00000467263 SBF2Q86WG5 1849 aa-1.6□□□□□ -2.67
SMC4-207ENST00000467263 TNFP01375 233 aa-1.6□□□□□ -2.67
SMC4-207ENST00000467263 B2MP61769 119 aa-1.6□□□□□ -2.67
SMC4-207ENST00000467263 RBM3P98179 157 aaKnown RBP-1.6□□□□□ -2.67
SMC4-207ENST00000467263 COX17Q14061 63 aa-1.6□□□□□ -2.67
SMC4-207ENST00000467263 PATJQ8NI35 1801 aa-1.61□□□□□ -2.67
SMC4-207ENST00000467263 DOCK2Q92608 1830 aa-1.61□□□□□ -2.67
SMC4-207ENST00000467263 TTC9CQ8N5M4 171 aa-1.61□□□□□ -2.67
SMC4-207ENST00000467263 AMELXQ99217 191 aa-1.61□□□□□ -2.67
SMC4-207ENST00000467263 TPT1P8Q9HAU6 139 aa-1.61□□□□□ -2.67
SMC4-207ENST00000467263 ARAP2Q8WZ64 1704 aa-1.61□□□□□ -2.67
SMC4-207ENST00000467263 ARPC5O15511 151 aa-1.62□□□□□ -2.67
SMC4-207ENST00000467263 PYDC1Q8WXC3 89 aa-1.62□□□□□ -2.67
SMC4-207ENST00000467263 UBR4Q5T4S7 5183 aa-1.62□□□□□ -2.67
SMC4-207ENST00000467263 KIAA1109Q2LD37 5005 aa-1.62□□□□□ -2.67
SMC4-207ENST00000467263 KIF21AQ7Z4S6 1674 aa-1.63□□□□□ -2.67
SMC4-207ENST00000467263 LZICQ8WZA0 190 aa-1.63□□□□□ -2.67
SMC4-207ENST00000467263 COPZ1P61923 177 aa-1.64□□□□□ -2.67
SMC4-207ENST00000467263 BAGE2Q86Y30 109 aa-1.64□□□□□ -2.67
SMC4-207ENST00000467263 MXRA5Q9NR99 2828 aa-1.65□□□□□ -2.67
SMC4-207ENST00000467263 M0R2T5 61 aa-1.65□□□□□ -2.67
SMC4-207ENST00000467263 PPIP5K1Q6PFW1 1433 aa-1.66□□□□□ -2.67
SMC4-207ENST00000467263 HIVEP1P15822 2718 aa-1.66□□□□□ -2.67
SMC4-207ENST00000467263 SPINK4O60575 86 aa-1.66□□□□□ -2.68
SMC4-207ENST00000467263 RPS25P62851 125 aaKnown RBP-1.66□□□□□ -2.68
SMC4-207ENST00000467263 KDM5AP29375 1690 aaKnown RBP-1.67□□□□□ -2.68
SMC4-207ENST00000467263 ANKRD30AQ9BXX3 1397 aa-1.67□□□□□ -2.68
SMC4-207ENST00000467263 F8VRH5 84 aa-1.67□□□□□ -2.68
SMC4-207ENST00000467263 UQCR11O14957 56 aa-1.67□□□□□ -2.68
SMC4-207ENST00000467263 HIST1H1DP16402 221 aaKnown RBP-1.67□□□□□ -2.68
SMC4-207ENST00000467263 Q6AWC8 147 aa-1.67□□□□□ -2.68
SMC4-207ENST00000467263 DEFB123Q8N688 67 aa-1.67□□□□□ -2.68
SMC4-207ENST00000467263 PIGBOS1A0A0B4J2F0 54 aa-1.68□□□□□ -2.68
SMC4-207ENST00000467263 SMCO1Q147U7 214 aa-1.68□□□□□ -2.68
SMC4-207ENST00000467263 DPH3Q96FX2 82 aa-1.68□□□□□ -2.68
SMC4-207ENST00000467263 TMEM191AQ9H0A3 160 aa-1.68□□□□□ -2.68
SMC4-207ENST00000467263 COPZ2Q9P299 210 aa-1.68□□□□□ -2.68
SMC4-207ENST00000467263 EPPK1P58107 5090 aaKnown RBP-1.69□□□□□ -2.68
SMC4-207ENST00000467263 PCNX1Q96RV3 2341 aa-1.69□□□□□ -2.68
SMC4-207ENST00000467263 TCEAL4Q96EI5 215 aa-1.69□□□□□ -2.68
SMC4-207ENST00000467263 APOC3P02656 99 aa-1.7□□□□□ -2.68
SMC4-207ENST00000467263 KLK9Q2XQG4 91 aa-1.7□□□□□ -2.68
SMC4-207ENST00000467263 AKAP14Q86UN6 197 aa-1.7□□□□□ -2.68
SMC4-207ENST00000467263 NDUFA4L2Q9NRX3 87 aa-1.7□□□□□ -2.68
SMC4-207ENST00000467263 IQSEC2Q5JU85 1478 aa-1.7□□□□□ -2.68
SMC4-207ENST00000467263 STARD9Q9P2P6 4700 aa-1.71□□□□□ -2.68
SMC4-207ENST00000467263 TPPP2P59282 170 aa-1.71□□□□□ -2.68
SMC4-207ENST00000467263 Q8N8P6 123 aa-1.71□□□□□ -2.68
SMC4-207ENST00000467263 PDCD10Q9BUL8 212 aa-1.71□□□□□ -2.68
SMC4-207ENST00000467263 DEFB105AQ8NG35 78 aa-1.72□□□□□ -2.68
SMC4-207ENST00000467263 ANP32BQ92688 251 aaKnown RBP-1.72□□□□□ -2.68
SMC4-207ENST00000467263 CCDC167Q9P0B6 97 aa-1.72□□□□□ -2.68
SMC4-207ENST00000467263 MYOM3Q5VTT5 1437 aa-1.73□□□□□ -2.69
SMC4-207ENST00000467263 IGLC7A0M8Q6 106 aa-1.73□□□□□ -2.69
SMC4-207ENST00000467263 SMIM21Q3B7S5 101 aa-1.73□□□□□ -2.69
SMC4-207ENST00000467263 LINC01558Q9Y6Z2 57 aa-1.73□□□□□ -2.69
SMC4-207ENST00000467263 RIMS1Q86UR5 1692 aaKnown RBP-1.74□□□□□ -2.69
SMC4-207ENST00000467263 POLA1P09884 1462 aaPredicted RBP-1.74□□□□□ -2.69
SMC4-207ENST00000467263 GAPVD1Q14C86 1478 aa-1.74□□□□□ -2.69
SMC4-207ENST00000467263 ZFHX3Q15911 3703 aa-1.74□□□□□ -2.69
SMC4-207ENST00000467263 KRTAP6-2Q3LI66 62 aa-1.74□□□□□ -2.69
SMC4-207ENST00000467263 LSM10Q969L4 123 aaKnown RBP-1.74□□□□□ -2.69
SMC4-207ENST00000467263 DYNLRB1Q9NP97 96 aa-1.74□□□□□ -2.69
SMC4-207ENST00000467263 CEP152O94986 1710 aa-1.74□□□□□ -2.69
SMC4-207ENST00000467263 BICRAQ9NZM4 1560 aa-1.75□□□□□ -2.69
SMC4-207ENST00000467263 C12orf73Q69YU5 71 aa-1.75□□□□□ -2.69
SMC4-207ENST00000467263 TSLPQ969D9 159 aa-1.75□□□□□ -2.69
SMC4-207ENST00000467263 ARHGEF12Q9NZN5 1544 aa-1.76□□□□□ -2.69
SMC4-207ENST00000467263 MGST2Q99735 147 aa-1.76□□□□□ -2.69
SMC4-207ENST00000467263 USP9YO00507 2555 aaPredicted RBP-1.76□□□□□ -2.69
SMC4-207ENST00000467263 SPRR2AP35326 72 aa-1.77□□□□□ -2.69
SMC4-207ENST00000467263 DR1Q01658 176 aa-1.77□□□□□ -2.69
SMC4-207ENST00000467263 SHANK2Q9UPX8 1470 aa-1.77□□□□□ -2.69
SMC4-207ENST00000467263 BTAF1O14981 1849 aa-1.77□□□□□ -2.69
SMC4-207ENST00000467263 PSME4Q14997 1843 aa-1.77□□□□□ -2.69
SMC4-207ENST00000467263 TRBV7-3A0A075B6L6 115 aa-1.78□□□□□ -2.69
SMC4-207ENST00000467263 COPS9Q8WXC6 57 aa-1.78□□□□□ -2.69
SMC4-207ENST00000467263 HMGN4O00479 90 aa-1.79□□□□□ -2.7
SMC4-207ENST00000467263 EPG5Q9HCE0 2579 aa-1.79□□□□□ -2.7
SMC4-207ENST00000467263 NBPF19A0A087WUL8 3843 aa-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms