RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CHCHD1Q96BP2 118 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 C20orf78Q9BR46 151 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 SAMD10Q9BYL1 202 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 NXT2Q9NPJ8 142 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 SERF1AO75920 110 aa9.62□□□□□ -0.87
HMGXB4-206ENST00000466438 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
HMGXB4-206ENST00000466438 RNASEKQ6P5S7 137 aaKnown RBP9.62□□□□□ -0.87
HMGXB4-206ENST00000466438 LECT2O14960 151 aa9.61□□□□□ -0.87
HMGXB4-206ENST00000466438 HSBP1O75506 76 aa9.61□□□□□ -0.87
HMGXB4-206ENST00000466438 ESDP10768 282 aa9.61□□□□□ -0.87
HMGXB4-206ENST00000466438 NRACQ8N912 160 aa9.61□□□□□ -0.87
HMGXB4-206ENST00000466438 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 PRSS47A8MTI9 375 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 M0QY20 66 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 LINC00614P0C842 121 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 SUMO2P61956 95 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 LAGE3Q14657 143 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 TMEM18Q96B42 140 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 ST20Q9HBF5 79 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
HMGXB4-206ENST00000466438 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 TRBV6-5A0A0K0K1A5 114 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 LOC389332A0A1B0GUA5 103 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 K7EMI3 77 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 GATA1P15976 413 aaPredicted RBP9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 NIT1Q86X76 327 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 Q8N8P6 123 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 SMIM2Q9BVW6 85 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
HMGXB4-206ENST00000466438 TRBV10-1A0A0K0K1A3 114 aa9.58□□□□□ -0.88
HMGXB4-206ENST00000466438 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
HMGXB4-206ENST00000466438 TIRAPP58753 221 aa9.58□□□□□ -0.88
HMGXB4-206ENST00000466438 PDZD11Q5EBL8 140 aa9.58□□□□□ -0.88
HMGXB4-206ENST00000466438 TCAPO15273 167 aa9.57□□□□□ -0.88
HMGXB4-206ENST00000466438 AMTP48728 403 aa9.57□□□□□ -0.88
HMGXB4-206ENST00000466438 LINC00310P59036 64 aa9.57□□□□□ -0.88
HMGXB4-206ENST00000466438 LELP1Q5T871 98 aa9.57□□□□□ -0.88
HMGXB4-206ENST00000466438 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-206ENST00000466438 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 SDHAF1A6NFY7 115 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 RHOHQ15669 191 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 SH2D6Q7Z4S9 175 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 KIR2DL4Q99706 377 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 PRADC1Q9BSG0 188 aa9.56□□□□□ -0.88
HMGXB4-206ENST00000466438 TRAV8-6A0A0B4J262 113 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 VCYO14598 125 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 IGHV3-30P01768 117 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 IGHV3-30-5P0DP03 117 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 RPL36AP83881 106 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 ORMDL2Q53FV1 153 aa9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 RPL36ALQ969Q0 106 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-206ENST00000466438 TRBV27A0A0K0K1C4 114 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 LOC105371267A0A1B0GV96 52 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 FABP4P15090 132 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 G0S2P27469 103 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 NEXN-AS1Q8NBZ9 246 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 BAALCQ8WXS3 180 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 HIST1H2BLQ99880 126 aa9.54□□□□□ -0.88
HMGXB4-206ENST00000466438 IGHV1-24A0A0C4DH33 117 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 LINC01549A6NIU2 74 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 I3L3M4 83 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 NUPR1O60356 82 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 HBDP02042 147 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 FCER1GP30273 86 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 POLR2KP53803 58 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 Q8N976 141 aa9.53□□□□□ -0.88
HMGXB4-206ENST00000466438 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
HMGXB4-206ENST00000466438 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
HMGXB4-206ENST00000466438 AKR1D1P51857 326 aa9.51□□□□□ -0.89
HMGXB4-206ENST00000466438 ODF1Q14990 250 aa9.51□□□□□ -0.89
HMGXB4-206ENST00000466438 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
HMGXB4-206ENST00000466438 HSPB8Q9UJY1 196 aa9.51□□□□□ -0.89
HMGXB4-206ENST00000466438 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 IFITM10A6NMD0 228 aa9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 LEPROTL1O95214 131 aa9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 COX11Q9Y6N1 276 aa9.5□□□□□ -0.89
HMGXB4-206ENST00000466438 COTL1Q14019 142 aa9.49□□□□□ -0.89
HMGXB4-206ENST00000466438 PMCHL1Q16048 86 aa9.49□□□□□ -0.89
HMGXB4-206ENST00000466438 OR10D4PQ8NGN7 298 aa9.49□□□□□ -0.89
HMGXB4-206ENST00000466438 MUC2Q02817 5179 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 UBE2D3P61077 147 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 UBE2D2P62837 147 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 GAGE1Q13065 139 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 GAGE4Q13068 117 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms