RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CRYBA4P53673 196 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 SH2D6Q7Z4S9 175 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 F8W1H4 67 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 TMEM263Q8WUH6 116 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 C19orf73Q9NVV2 129 aa13.39□□□□□ -0.27
TSPAN4-210ENST00000464987 A0A0J9YXY3 114 aa13.38□□□□□ -0.27
TSPAN4-210ENST00000464987 A4D1N5 150 aa13.38□□□□□ -0.27
TSPAN4-210ENST00000464987 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 TRAV26-1A0A087WT03 109 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 TINCRA0A1B0GVN0 87 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 J3QR89 54 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 ETDBQ3ZM63 59 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
TSPAN4-210ENST00000464987 IGHV1-58A0A0C4DH39 117 aa13.36□□□□□ -0.27
TSPAN4-210ENST00000464987 PLAC8L1A1L4L8 177 aa13.36□□□□□ -0.27
TSPAN4-210ENST00000464987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-210ENST00000464987 HILS1P60008 231 aa13.36□□□□□ -0.27
TSPAN4-210ENST00000464987 UBE2D3P61077 147 aa13.36□□□□□ -0.27
TSPAN4-210ENST00000464987 UBE2D2P62837 147 aa13.36□□□□□ -0.27
TSPAN4-210ENST00000464987 K7EQD1 137 aa13.35□□□□□ -0.27
TSPAN4-210ENST00000464987 NDUFA7O95182 113 aa13.35□□□□□ -0.27
TSPAN4-210ENST00000464987 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
TSPAN4-210ENST00000464987 HIVEP2P31629 2446 aa13.35□□□□□ -0.27
TSPAN4-210ENST00000464987 PSMB2P49721 201 aa13.35□□□□□ -0.27
TSPAN4-210ENST00000464987 LITAFQ99732 161 aa13.35□□□□□ -0.27
TSPAN4-210ENST00000464987 COX6A2Q02221 97 aa13.34□□□□□ -0.27
TSPAN4-210ENST00000464987 VSIG2Q96IQ7 327 aa13.34□□□□□ -0.27
TSPAN4-210ENST00000464987 CDKN2A-AS1Q9UH64 79 aa13.34□□□□□ -0.27
TSPAN4-210ENST00000464987 GAGE12JA6NER3 117 aa13.33□□□□□ -0.27
TSPAN4-210ENST00000464987 KRTAP10-3P60369 221 aa13.33□□□□□ -0.27
TSPAN4-210ENST00000464987 GAGE4Q13068 117 aa13.33□□□□□ -0.27
TSPAN4-210ENST00000464987 GAGE5Q13069 117 aa13.33□□□□□ -0.27
TSPAN4-210ENST00000464987 ZNF418Q8TF45 676 aaPredicted RBP13.33□□□□□ -0.27
TSPAN4-210ENST00000464987 TRAV4A0A0B4J268 109 aa13.33□□□□□ -0.28
TSPAN4-210ENST00000464987 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
TSPAN4-210ENST00000464987 PRO1854Q9UHT4 67 aa13.33□□□□□ -0.28
TSPAN4-210ENST00000464987 NDUFA12Q9UI09 145 aa13.33□□□□□ -0.28
TSPAN4-210ENST00000464987 CYSRT1A8MQ03 144 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 SMCPP49901 116 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 DGAT2L7PQ6IED9 249 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 GEMIN7Q9H840 131 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 GAGE7O76087 117 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 RPL36AP83881 106 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 CFAP161Q6P656 301 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 RPL36ALQ969Q0 106 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-210ENST00000464987 LOC100131303A0A0U1RQF7 123 aa13.31□□□□□ -0.28
TSPAN4-210ENST00000464987 TCL1BO95988 128 aa13.31□□□□□ -0.28
TSPAN4-210ENST00000464987 FN1P02751 2386 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-210ENST00000464987 H7C2G1 150 aa13.3□□□□□ -0.28
TSPAN4-210ENST00000464987 INSL3P51460 131 aa13.3□□□□□ -0.28
TSPAN4-210ENST00000464987 NPC2P61916 151 aa13.3□□□□□ -0.28
TSPAN4-210ENST00000464987 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-210ENST00000464987 TRBV10-1A0A0K0K1A3 114 aa13.29□□□□□ -0.28
TSPAN4-210ENST00000464987 IGHV3-33P01772 117 aa13.29□□□□□ -0.28
TSPAN4-210ENST00000464987 C16orf74Q96GX8 76 aa13.29□□□□□ -0.28
TSPAN4-210ENST00000464987 TRGV2A0A075B6R0 118 aa13.28□□□□□ -0.28
TSPAN4-210ENST00000464987 PRSS2P07478 247 aa13.28□□□□□ -0.28
TSPAN4-210ENST00000464987 CMC4P56277 68 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-210ENST00000464987 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
TSPAN4-210ENST00000464987 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
TSPAN4-210ENST00000464987 VWFP04275 2813 aa13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 IGLV5-45A0A087WSX0 123 aa13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 TIRAPP58753 221 aa13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 DAZ4Q86SG3 579 aaKnown RBP13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 SBSPONQ8IVN8 264 aa13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 FAM110AQ9BQ89 295 aa13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 DAZ3Q9NR90 486 aaKnown RBP13.27□□□□□ -0.28
TSPAN4-210ENST00000464987 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.29
TSPAN4-210ENST00000464987 OTOGQ6ZRI0 2925 aa13.26□□□□□ -0.29
TSPAN4-210ENST00000464987 TRAV13-1A0A0B4J241 112 aa13.26□□□□□ -0.29
TSPAN4-210ENST00000464987 A0A0B4J2C4 111 aa13.26□□□□□ -0.29
TSPAN4-210ENST00000464987 SCGB1C2P0DMR2 95 aa13.25□□□□□ -0.29
TSPAN4-210ENST00000464987 DAND5Q8N907 189 aa13.25□□□□□ -0.29
TSPAN4-210ENST00000464987 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
TSPAN4-210ENST00000464987 SPANXDQ9BXN6 97 aa13.24□□□□□ -0.29
TSPAN4-210ENST00000464987 SPANXCQ9NY87 97 aa13.24□□□□□ -0.29
TSPAN4-210ENST00000464987 ERG28Q9UKR5 140 aa13.24□□□□□ -0.29
TSPAN4-210ENST00000464987 NOTCH2Q04721 2471 aa13.23□□□□□ -0.29
TSPAN4-210ENST00000464987 LY6G6DO95868 133 aa13.23□□□□□ -0.29
TSPAN4-210ENST00000464987 OVOL2Q9BRP0 275 aa13.23□□□□□ -0.29
TSPAN4-210ENST00000464987 C1QTNF4Q9BXJ3 329 aa13.23□□□□□ -0.29
TSPAN4-210ENST00000464987 CDC42SE2Q9NRR3 84 aa13.23□□□□□ -0.29
TSPAN4-210ENST00000464987 MIAQ16674 131 aa13.22□□□□□ -0.29
TSPAN4-210ENST00000464987 LYRM7Q5U5X0 104 aa13.22□□□□□ -0.29
TSPAN4-210ENST00000464987 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-210ENST00000464987 NBEAL2Q6ZNJ1 2754 aa13.21□□□□□ -0.29
TSPAN4-210ENST00000464987 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-210ENST00000464987 HERVK_113P63121 156 aa13.21□□□□□ -0.29
TSPAN4-210ENST00000464987 ZNF625Q96I27 306 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-210ENST00000464987 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms