RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 DEFB4AO15263 64 aa12.87□□□□□ -0.35
ATPAF2-202ENST00000462733 P0DMU3 169 aa12.87□□□□□ -0.35
ATPAF2-202ENST00000462733 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
ATPAF2-202ENST00000462733 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
ATPAF2-202ENST00000462733 EMP1P54849 157 aa12.87□□□□□ -0.35
ATPAF2-202ENST00000462733 IGHV4-28A0A0C4DH34 117 aa12.86□□□□□ -0.35
ATPAF2-202ENST00000462733 RHODO00212 210 aa12.86□□□□□ -0.35
ATPAF2-202ENST00000462733 UBE2D1P51668 147 aa12.86□□□□□ -0.35
ATPAF2-202ENST00000462733 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
ATPAF2-202ENST00000462733 A0A0J9YY99 117 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 F8W1H4 67 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 MIFP14174 115 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 PLEKHB2Q96CS7 222 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 C16orf74Q96GX8 76 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 SPXQ9BT56 116 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 LEPROTO15243 131 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 SRSF9Q13242 221 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 Q8NAQ8 132 aa12.85□□□□□ -0.35
ATPAF2-202ENST00000462733 COL7A1Q02388 2944 aa12.84□□□□□ -0.35
ATPAF2-202ENST00000462733 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
ATPAF2-202ENST00000462733 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
ATPAF2-202ENST00000462733 TMEM223A0PJW6 202 aa12.83□□□□□ -0.36
ATPAF2-202ENST00000462733 J3QQQ9 107 aa12.83□□□□□ -0.36
ATPAF2-202ENST00000462733 LGALS3P17931 250 aaKnown RBP12.83□□□□□ -0.36
ATPAF2-202ENST00000462733 SLC25A29Q8N8R3 303 aa12.83□□□□□ -0.36
ATPAF2-202ENST00000462733 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 NHLRC4P0CG21 123 aaPredicted RBP12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 AMELXQ99217 191 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 VCX2Q9H322 139 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 LYRM7Q5U5X0 104 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 DNAJC30Q96LL9 226 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 NOP10Q9NPE3 64 aaKnown RBP12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 TNFRSF18Q9Y5U5 241 aa12.82□□□□□ -0.36
ATPAF2-202ENST00000462733 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
ATPAF2-202ENST00000462733 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
ATPAF2-202ENST00000462733 SPANXA1Q9NS26 97 aa12.8□□□□□ -0.36
ATPAF2-202ENST00000462733 A0A0J9YWU9 116 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 CFAP126Q5VTH2 177 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 IL17DQ8TAD2 202 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 DEFB104AQ8WTQ1 72 aa12.79□□□□□ -0.36
ATPAF2-202ENST00000462733 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
ATPAF2-202ENST00000462733 MRPS36P82909 103 aaKnown RBP12.77□□□□□ -0.36
ATPAF2-202ENST00000462733 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.36
ATPAF2-202ENST00000462733 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.36
ATPAF2-202ENST00000462733 OPRPNQ99935 248 aaPredicted RBP12.77□□□□□ -0.36
ATPAF2-202ENST00000462733 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.36
ATPAF2-202ENST00000462733 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
ATPAF2-202ENST00000462733 RS1O15537 224 aa12.76□□□□□ -0.37
ATPAF2-202ENST00000462733 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
ATPAF2-202ENST00000462733 CELA1Q9UNI1 258 aa12.76□□□□□ -0.37
ATPAF2-202ENST00000462733 J3QR89 54 aa12.76□□□□□ -0.37
ATPAF2-202ENST00000462733 Q6ZTI0 123 aa12.76□□□□□ -0.37
ATPAF2-202ENST00000462733 A0A0J9YXV3 536 aa12.75□□□□□ -0.37
ATPAF2-202ENST00000462733 TSPAN13O95857 204 aa12.75□□□□□ -0.37
ATPAF2-202ENST00000462733 RPL24P83731 157 aaKnown RBP12.75□□□□□ -0.37
ATPAF2-202ENST00000462733 PRO0461Q9UI25 63 aa12.75□□□□□ -0.37
ATPAF2-202ENST00000462733 H3BMG7 143 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 GAGE7O76087 117 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 DEFB130BP0DP73 79 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 DEFB130AP0DP74 79 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 UBE2D3P61077 147 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 UBE2D2P62837 147 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 TEX48A0A1B0GUV7 120 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 LYRM9A8MSI8 78 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 CHCHD7Q9BUK0 85 aa12.74□□□□□ -0.37
ATPAF2-202ENST00000462733 STAB2Q8WWQ8 2551 aa12.73□□□□□ -0.37
ATPAF2-202ENST00000462733 IGHV3-73A0A0B4J1V6 119 aa12.73□□□□□ -0.37
ATPAF2-202ENST00000462733 FAM104AQ969W3 186 aa12.73□□□□□ -0.37
ATPAF2-202ENST00000462733 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
ATPAF2-202ENST00000462733 WFDC2Q14508 124 aa12.72□□□□□ -0.37
ATPAF2-202ENST00000462733 C10orf126Q8N4M7 172 aa12.72□□□□□ -0.37
ATPAF2-202ENST00000462733 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
ATPAF2-202ENST00000462733 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.37
ATPAF2-202ENST00000462733 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
ATPAF2-202ENST00000462733 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 CFC1BP0CG36 223 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 CFC1P0CG37 223 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 DAD1P61803 113 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 Q6ZSN1 163 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 ATP6V0E2Q8NHE4 81 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.38
ATPAF2-202ENST00000462733 A0A0B4J2C4 111 aa12.7□□□□□ -0.38
ATPAF2-202ENST00000462733 APOMO95445 188 aa12.7□□□□□ -0.38
ATPAF2-202ENST00000462733 C11orf45Q8TAV5 145 aa12.7□□□□□ -0.38
ATPAF2-202ENST00000462733 TGP01266 2768 aa12.69□□□□□ -0.38
ATPAF2-202ENST00000462733 NACAE9PAV3 2078 aa12.69□□□□□ -0.38
ATPAF2-202ENST00000462733 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.69□□□□□ -0.38
ATPAF2-202ENST00000462733 IGHV3-30-3P0DP02 117 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms