RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TMEM18Q96B42 140 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 LINC00614P0C842 121 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 TNP2Q05952 138 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 MIAQ16674 131 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 MAPKAPK5-AS1Q8N8E1 139 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 TMEM101Q96IK0 257 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
SSBP1-202ENST00000461433 DNAH17Q9UFH2 4485 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 CRPP02741 224 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
SSBP1-202ENST00000461433 LINC00336Q6ZUF6 198 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 FA2HQ7L5A8 372 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 SPANXA1Q9NS26 97 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 CYSLTR1Q9Y271 337 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 PYGO1Q9Y3Y4 419 aa7.5□□□□□ -1.21
SSBP1-202ENST00000461433 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 IGKV2D-24A0A075B6R9 120 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 A0A096LNJ9 63 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 PRSS29PA6NIE9 313 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 SMAGPQ0VAQ4 97 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 RNASE13Q5GAN3 156 aaKnown RBP7.49□□□□□ -1.21
SSBP1-202ENST00000461433 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 Q6ZUT4 128 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 TOMM6Q96B49 74 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
SSBP1-202ENST00000461433 LRCOL1A6NCL2 159 aa7.48□□□□□ -1.21
SSBP1-202ENST00000461433 MRPS36P82909 103 aaKnown RBP7.48□□□□□ -1.21
SSBP1-202ENST00000461433 IGLV10-54A0A075B6I4 117 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 IGLV4-3A0A075B6K6 122 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 TRAV8-4A0A0B4J246 113 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 IGKV3OR2-268A0A0C4DH90 116 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 RMI2Q96E14 147 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 TM2D2Q9BX73 214 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 A0A1B0GVY2 172 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 G0S2P27469 103 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 LINC00310P59036 64 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 RAB5BP61020 215 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
SSBP1-202ENST00000461433 PSCAO43653 123 aa7.46□□□□□ -1.22
SSBP1-202ENST00000461433 WFDC2Q14508 124 aa7.46□□□□□ -1.22
SSBP1-202ENST00000461433 PMCHL1Q16048 86 aa7.46□□□□□ -1.22
SSBP1-202ENST00000461433 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
SSBP1-202ENST00000461433 A0A087WTM6 91 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BKO60814 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BJP06899 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 NPSP0C0P6 89 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BOP23527 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BBP33778 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BDP58876 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BCP62807 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST2H2BEQ16778 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-202ENST00000461433 LINC00173Q6ZV60 143 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 ERASQ7Z444 233 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BHQ93079 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 TMEM141Q96I45 108 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 TIMM17AQ99595 171 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BNQ99877 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 HIST1H2BMQ99879 126 aa7.45□□□□□ -1.22
SSBP1-202ENST00000461433 NUPR1O60356 82 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 ZC2HC1BQ5TFG8 222 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 BAGE3Q86Y29 109 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 CHCHD10Q8WYQ3 142 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-202ENST00000461433 AMELXQ99217 191 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 PKD1P98161 4303 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 CCL25O15444 150 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 SERF1AO75920 110 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 PDZD11Q5EBL8 140 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 SCGB3A1Q96QR1 104 aa7.44□□□□□ -1.22
SSBP1-202ENST00000461433 TRAV13-1A0A0B4J241 112 aa7.43□□□□□ -1.22
SSBP1-202ENST00000461433 GAGE12HA6NDE8 117 aa7.43□□□□□ -1.22
SSBP1-202ENST00000461433 LECT2O14960 151 aa7.43□□□□□ -1.22
SSBP1-202ENST00000461433 HBDP02042 147 aa7.43□□□□□ -1.22
SSBP1-202ENST00000461433 FOXI1Q12951 378 aa7.43□□□□□ -1.22
SSBP1-202ENST00000461433 SS18Q15532 418 aa7.43□□□□□ -1.22
SSBP1-202ENST00000461433 C1orf196B1AJZ1 125 aa7.42□□□□□ -1.22
SSBP1-202ENST00000461433 XCL1P47992 114 aa7.42□□□□□ -1.22
SSBP1-202ENST00000461433 FAM19A2Q8N3H0 131 aa7.42□□□□□ -1.22
SSBP1-202ENST00000461433 DNAH11Q96DT5 4516 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 IFITM10A6NMD0 228 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 TEX43Q6ZNM6 134 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 VCX2Q9H322 139 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 HSBP1O75506 76 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 UBE2D1P51668 147 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 Q6ZN92 141 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 Q8N814 137 aa7.41□□□□□ -1.22
SSBP1-202ENST00000461433 EPPK1P58107 5090 aaKnown RBP7.4□□□□□ -1.22
SSBP1-202ENST00000461433 USP17L23D6RBM5 183 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms