RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 CENPWQ5EE01 88 aa7.03□□□□□ -1.28
HCFC1-204ENST00000461098 C11orf52Q96A22 123 aa7.03□□□□□ -1.28
HCFC1-204ENST00000461098 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
HCFC1-204ENST00000461098 TSHBP01222 138 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 IFNA1P01562 189 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 RPL13AP40429 203 aaKnown RBP7.02□□□□□ -1.29
HCFC1-204ENST00000461098 EIF5AP63241 154 aaKnown RBP7.02□□□□□ -1.29
HCFC1-204ENST00000461098 TWIST1Q15672 202 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 EIF5AL1Q6IS14 154 aaKnown RBP7.02□□□□□ -1.29
HCFC1-204ENST00000461098 MRPL52Q86TS9 123 aaKnown RBP7.02□□□□□ -1.29
HCFC1-204ENST00000461098 KCNRGQ8N5I3 272 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 BTF3L4Q96K17 158 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
HCFC1-204ENST00000461098 TRAV1-1A0A0B4J248 108 aa7.01□□□□□ -1.29
HCFC1-204ENST00000461098 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
HCFC1-204ENST00000461098 I3L3M4 83 aa7.01□□□□□ -1.29
HCFC1-204ENST00000461098 UBE2D1P51668 147 aa7.01□□□□□ -1.29
HCFC1-204ENST00000461098 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
HCFC1-204ENST00000461098 FAM213BQ8TBF2 198 aa7.01□□□□□ -1.29
HCFC1-204ENST00000461098 CARHSP1Q9Y2V2 147 aaKnown RBP7.01□□□□□ -1.29
HCFC1-204ENST00000461098 TRBV20OR9-2A0A075B6H5 130 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 XKRY2A2RUG3 117 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 COX7A2LO14548 114 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 TSPAN13O95857 204 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 MALP21145 153 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 CCL20P78556 96 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 RNF151Q2KHN1 245 aa7□□□□□ -1.29
HCFC1-204ENST00000461098 TRBV6-5A0A0K0K1A5 114 aa6.99□□□□□ -1.29
HCFC1-204ENST00000461098 C1orf196B1AJZ1 125 aa6.99□□□□□ -1.29
HCFC1-204ENST00000461098 PMCHP20382 165 aa6.99□□□□□ -1.29
HCFC1-204ENST00000461098 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
HCFC1-204ENST00000461098 SMIM12Q96EX1 92 aa6.99□□□□□ -1.29
HCFC1-204ENST00000461098 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
HCFC1-204ENST00000461098 RNASE7Q9H1E1 156 aaKnown RBP6.99□□□□□ -1.29
HCFC1-204ENST00000461098 RPP21Q9H633 154 aaKnown RBP6.99□□□□□ -1.29
HCFC1-204ENST00000461098 C5orf38Q86SI9 138 aa6.98□□□□□ -1.29
HCFC1-204ENST00000461098 TMEM242Q9NWH2 141 aa6.98□□□□□ -1.29
HCFC1-204ENST00000461098 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
HCFC1-204ENST00000461098 UMAD1C9J7I0 102 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 ARPC5O15511 151 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 H2AFB1P0C5Y9 115 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 GNG4P50150 75 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 C10orf25Q5T742 122 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 TEX261Q6UWH6 196 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
HCFC1-204ENST00000461098 TSKUQ8WUA8 353 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
HCFC1-204ENST00000461098 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
HCFC1-204ENST00000461098 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
HCFC1-204ENST00000461098 POLR2KP53803 58 aaKnown RBP6.96□□□□□ -1.3
HCFC1-204ENST00000461098 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
HCFC1-204ENST00000461098 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
HCFC1-204ENST00000461098 GNG13Q9P2W3 67 aa6.96□□□□□ -1.3
HCFC1-204ENST00000461098 A0A087X002 238 aa6.95□□□□□ -1.3
HCFC1-204ENST00000461098 TRBV27A0A0K0K1C4 114 aa6.95□□□□□ -1.3
HCFC1-204ENST00000461098 FAM210AQ96ND0 272 aa6.95□□□□□ -1.3
HCFC1-204ENST00000461098 MANBALQ9NQG1 85 aa6.95□□□□□ -1.3
HCFC1-204ENST00000461098 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
HCFC1-204ENST00000461098 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
HCFC1-204ENST00000461098 TRAV13-1A0A0B4J241 112 aa6.94□□□□□ -1.3
HCFC1-204ENST00000461098 C7orf77A4D0Y5 90 aa6.94□□□□□ -1.3
HCFC1-204ENST00000461098 OR10D4PQ8NGN7 298 aa6.94□□□□□ -1.3
HCFC1-204ENST00000461098 IMMP2LQ96T52 175 aa6.94□□□□□ -1.3
HCFC1-204ENST00000461098 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
HCFC1-204ENST00000461098 K7EN84 100 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 M0QXV9 152 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 ZNF861PO60384 105 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 SMDT1Q9H4I9 107 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 ST20Q9HBF5 79 aa6.93□□□□□ -1.3
HCFC1-204ENST00000461098 F8WDY8 70 aa6.92□□□□□ -1.3
HCFC1-204ENST00000461098 UBE2BP63146 152 aa6.92□□□□□ -1.3
HCFC1-204ENST00000461098 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
HCFC1-204ENST00000461098 SMIM15Q7Z3B0 74 aa6.92□□□□□ -1.3
HCFC1-204ENST00000461098 BIN3Q9NQY0 253 aa6.92□□□□□ -1.3
HCFC1-204ENST00000461098 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
HCFC1-204ENST00000461098 SMLR1H3BR10 107 aa6.91□□□□□ -1.3
HCFC1-204ENST00000461098 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
HCFC1-204ENST00000461098 TMEM241Q24JQ0 296 aa6.91□□□□□ -1.3
HCFC1-204ENST00000461098 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
HCFC1-204ENST00000461098 Q6ZUT4 128 aa6.91□□□□□ -1.3
HCFC1-204ENST00000461098 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
HCFC1-204ENST00000461098 RETNLBQ9BQ08 111 aa6.91□□□□□ -1.3
HCFC1-204ENST00000461098 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
HCFC1-204ENST00000461098 NDUFA1O15239 70 aa6.9□□□□□ -1.3
HCFC1-204ENST00000461098 PDE6DO43924 150 aa6.9□□□□□ -1.3
HCFC1-204ENST00000461098 ZNF345Q14585 488 aa6.9□□□□□ -1.3
HCFC1-204ENST00000461098 OCC1Q8TAD7 63 aa6.9□□□□□ -1.3
HCFC1-204ENST00000461098 MED9Q9NWA0 146 aa6.9□□□□□ -1.3
HCFC1-204ENST00000461098 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
HCFC1-204ENST00000461098 RAB4AP20338 218 aa6.88□□□□□ -1.31
HCFC1-204ENST00000461098 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
HCFC1-204ENST00000461098 TYMSOSQ8TAI1 123 aa6.88□□□□□ -1.31
HCFC1-204ENST00000461098 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
HCFC1-204ENST00000461098 VCYO14598 125 aa6.87□□□□□ -1.31
HCFC1-204ENST00000461098 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
HCFC1-204ENST00000461098 TMEM191AQ9H0A3 160 aa6.87□□□□□ -1.31
HCFC1-204ENST00000461098 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms