RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
RFX3-210ENST00000457373 RPS10P5Q9NQ39 176 aa6.69□□□□□ -1.34
RFX3-210ENST00000457373 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 H7C423 109 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 APOC3P02656 99 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 PPBPP02775 128 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 FGF6P10767 208 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 ESDP10768 282 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 S100PP25815 95 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 MIAQ16674 131 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 ORMDL3Q8N138 153 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 PRELID3AQ96N28 172 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 C20orf78Q9BR46 151 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
RFX3-210ENST00000457373 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
RFX3-210ENST00000457373 HLA-DQA1P01909 254 aa6.67□□□□□ -1.34
RFX3-210ENST00000457373 RHEBQ15382 184 aa6.67□□□□□ -1.34
RFX3-210ENST00000457373 Q8N814 137 aa6.67□□□□□ -1.34
RFX3-210ENST00000457373 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
RFX3-210ENST00000457373 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.66□□□□□ -1.34
RFX3-210ENST00000457373 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
RFX3-210ENST00000457373 LOC389332A0A1B0GUA5 103 aa6.66□□□□□ -1.34
RFX3-210ENST00000457373 GAGE12HA6NDE8 117 aa6.66□□□□□ -1.34
RFX3-210ENST00000457373 PHOX2AO14813 284 aa6.66□□□□□ -1.34
RFX3-210ENST00000457373 NDUFA5Q16718 116 aa6.66□□□□□ -1.34
RFX3-210ENST00000457373 SMIM2Q9BVW6 85 aa6.66□□□□□ -1.34
RFX3-210ENST00000457373 DYNC1H1Q14204 4646 aaKnown RBP6.66□□□□□ -1.34
RFX3-210ENST00000457373 PKD1P98161 4303 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 TCAPO15273 167 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 ZNF25P17030 456 aaPredicted RBP6.65□□□□□ -1.34
RFX3-210ENST00000457373 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
RFX3-210ENST00000457373 KIAA1644Q3SXP7 199 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.34
RFX3-210ENST00000457373 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
RFX3-210ENST00000457373 SNAPINO95295 136 aa6.64□□□□□ -1.35
RFX3-210ENST00000457373 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
RFX3-210ENST00000457373 SVBPQ8N300 66 aa6.64□□□□□ -1.35
RFX3-210ENST00000457373 TMEM18Q96B42 140 aa6.64□□□□□ -1.35
RFX3-210ENST00000457373 MAP1LC3AQ9H492 121 aa6.64□□□□□ -1.35
RFX3-210ENST00000457373 RAB5AP20339 215 aa6.63□□□□□ -1.35
RFX3-210ENST00000457373 MRPL52Q86TS9 123 aaKnown RBP6.63□□□□□ -1.35
RFX3-210ENST00000457373 SLC7A5P1Q8MH63 180 aa6.63□□□□□ -1.35
RFX3-210ENST00000457373 NTN5Q8WTR8 489 aaPredicted RBP6.63□□□□□ -1.35
RFX3-210ENST00000457373 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
RFX3-210ENST00000457373 LAMTOR2Q9Y2Q5 125 aa6.63□□□□□ -1.35
RFX3-210ENST00000457373 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
RFX3-210ENST00000457373 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
RFX3-210ENST00000457373 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
RFX3-210ENST00000457373 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
RFX3-210ENST00000457373 COX19Q49B96 90 aa6.62□□□□□ -1.35
RFX3-210ENST00000457373 ZNF664Q8N3J9 261 aa6.62□□□□□ -1.35
RFX3-210ENST00000457373 GNB1LQ9BYB4 327 aa6.62□□□□□ -1.35
RFX3-210ENST00000457373 TGIF2-C20orf24A0A0A6YYL0 155 aa6.61□□□□□ -1.35
RFX3-210ENST00000457373 LINC00959A0A1B0GUT2 108 aa6.61□□□□□ -1.35
RFX3-210ENST00000457373 KRTAP10-1P60331 282 aa6.61□□□□□ -1.35
RFX3-210ENST00000457373 C14orf177Q52M58 125 aa6.61□□□□□ -1.35
RFX3-210ENST00000457373 RNASE13Q5GAN3 156 aaKnown RBP6.61□□□□□ -1.35
RFX3-210ENST00000457373 Q8N8P6 123 aa6.61□□□□□ -1.35
RFX3-210ENST00000457373 CHCHD10Q8WYQ3 142 aaPredicted RBP6.61□□□□□ -1.35
RFX3-210ENST00000457373 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
RFX3-210ENST00000457373 FABP9Q0Z7S8 132 aa6.6□□□□□ -1.35
RFX3-210ENST00000457373 SS18Q15532 418 aa6.6□□□□□ -1.35
RFX3-210ENST00000457373 Q6ZUT4 128 aa6.6□□□□□ -1.35
RFX3-210ENST00000457373 DNAH5Q8TE73 4624 aa6.6□□□□□ -1.35
RFX3-210ENST00000457373 CCL25O15444 150 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 MT-ND6P03923 174 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 PRSS1P07477 247 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 IFI27P40305 119 aaPredicted RBP6.59□□□□□ -1.35
RFX3-210ENST00000457373 XCL1P47992 114 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 LINC01620Q4KN68 170 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 OPRPNQ99935 248 aaPredicted RBP6.59□□□□□ -1.35
RFX3-210ENST00000457373 TIMM21Q9BVV7 248 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.35
RFX3-210ENST00000457373 TRAPPC1Q9Y5R8 145 aa6.59□□□□□ -1.35
RFX3-210ENST00000457373 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
RFX3-210ENST00000457373 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
RFX3-210ENST00000457373 PRSS3P2Q8NHM4 247 aa6.58□□□□□ -1.36
RFX3-210ENST00000457373 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
RFX3-210ENST00000457373 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
RFX3-210ENST00000457373 hDV102S1A0JD36 115 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 PRYO14603 147 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 FOXI1Q12951 378 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 ORMDL2Q53FV1 153 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 C2orf66Q6UXQ4 117 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 CYSLTR1Q9Y271 337 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
RFX3-210ENST00000457373 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
RFX3-210ENST00000457373 C1orf196B1AJZ1 125 aa6.56□□□□□ -1.36
RFX3-210ENST00000457373 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
RFX3-210ENST00000457373 C15orf56Q8N910 161 aa6.56□□□□□ -1.36
RFX3-210ENST00000457373 FAM104AQ969W3 186 aa6.56□□□□□ -1.36
RFX3-210ENST00000457373 K7EMI3 77 aa6.55□□□□□ -1.36
RFX3-210ENST00000457373 XGP55808 180 aa6.55□□□□□ -1.36
RFX3-210ENST00000457373 HAMPP81172 84 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms