RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TRAV8-4A0A0B4J246 113 aa9.59□□□□□ -0.87
HMGXB4-204ENST00000455359 RTL8CO15255 209 aa9.59□□□□□ -0.87
HMGXB4-204ENST00000455359 REG3AQ06141 175 aa9.59□□□□□ -0.87
HMGXB4-204ENST00000455359 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
HMGXB4-204ENST00000455359 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
HMGXB4-204ENST00000455359 DNAH10Q8IVF4 4471 aa9.59□□□□□ -0.87
HMGXB4-204ENST00000455359 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
HMGXB4-204ENST00000455359 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
HMGXB4-204ENST00000455359 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
HMGXB4-204ENST00000455359 ZNF664Q8N3J9 261 aa9.58□□□□□ -0.88
HMGXB4-204ENST00000455359 Q9HAA7 133 aa9.58□□□□□ -0.88
HMGXB4-204ENST00000455359 LINC00614P0C842 121 aa9.57□□□□□ -0.88
HMGXB4-204ENST00000455359 C1orf43Q9BWL3 253 aa9.57□□□□□ -0.88
HMGXB4-204ENST00000455359 CCL25O15444 150 aa9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 CHCHD1Q96BP2 118 aaKnown RBP9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 PSCAO43653 123 aa9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 PAPPA-AS1Q5QFB9 102 aa9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
HMGXB4-204ENST00000455359 IGKV2D-24A0A075B6R9 120 aa9.55□□□□□ -0.88
HMGXB4-204ENST00000455359 IGIPA6NJ69 53 aa9.55□□□□□ -0.88
HMGXB4-204ENST00000455359 BAGE3Q86Y29 109 aa9.55□□□□□ -0.88
HMGXB4-204ENST00000455359 URB1-AS1Q96HZ7 61 aa9.55□□□□□ -0.88
HMGXB4-204ENST00000455359 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
HMGXB4-204ENST00000455359 TMEM141Q96I45 108 aa9.54□□□□□ -0.88
HMGXB4-204ENST00000455359 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
HMGXB4-204ENST00000455359 Q6ZN92 141 aa9.53□□□□□ -0.88
HMGXB4-204ENST00000455359 Q6ZUT4 128 aa9.53□□□□□ -0.88
HMGXB4-204ENST00000455359 ERASQ7Z444 233 aa9.53□□□□□ -0.88
HMGXB4-204ENST00000455359 IGLV4-3A0A075B6K6 122 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 C1orf196B1AJZ1 125 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 EREGO14944 169 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 HBDP02042 147 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 SS18Q15532 418 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
HMGXB4-204ENST00000455359 TNP2Q05952 138 aa9.51□□□□□ -0.89
HMGXB4-204ENST00000455359 KRTAP26-1Q6PEX3 210 aa9.51□□□□□ -0.89
HMGXB4-204ENST00000455359 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
HMGXB4-204ENST00000455359 VCX2Q9H322 139 aa9.51□□□□□ -0.89
HMGXB4-204ENST00000455359 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
HMGXB4-204ENST00000455359 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-204ENST00000455359 AMELXQ99217 191 aa9.5□□□□□ -0.89
HMGXB4-204ENST00000455359 C2orf88Q9BSF0 95 aa9.5□□□□□ -0.89
HMGXB4-204ENST00000455359 FAT2Q9NYQ8 4349 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 A0A087WTM6 91 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 A0A096LNJ9 63 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 IFITM10A6NMD0 228 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BKO60814 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HSBP1O75506 76 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BJP06899 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BOP23527 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BBP33778 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BDP58876 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BCP62807 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST2H2BEQ16778 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 PDZD11Q5EBL8 140 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BHQ93079 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BNQ99877 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 HIST1H2BMQ99879 126 aa9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-204ENST00000455359 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
HMGXB4-204ENST00000455359 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
HMGXB4-204ENST00000455359 ATP5LO75964 103 aa9.48□□□□□ -0.89
HMGXB4-204ENST00000455359 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
HMGXB4-204ENST00000455359 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
HMGXB4-204ENST00000455359 GAGE12HA6NDE8 117 aa9.47□□□□□ -0.89
HMGXB4-204ENST00000455359 SERF1AO75920 110 aa9.47□□□□□ -0.89
HMGXB4-204ENST00000455359 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-204ENST00000455359 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
HMGXB4-204ENST00000455359 FRAS1Q86XX4 4008 aa9.46□□□□□ -0.89
HMGXB4-204ENST00000455359 XCL1P47992 114 aa9.46□□□□□ -0.9
HMGXB4-204ENST00000455359 SEC11AP67812 179 aa9.46□□□□□ -0.9
HMGXB4-204ENST00000455359 FOXI1Q12951 378 aa9.46□□□□□ -0.9
HMGXB4-204ENST00000455359 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 UBE2D1P51668 147 aa9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 LINC00310P59036 64 aa9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 COA6Q5JTJ3 125 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 LINC00173Q6ZV60 143 aa9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 FAM19A3Q7Z5A8 133 aa9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
HMGXB4-204ENST00000455359 PMVKQ15126 192 aa9.44□□□□□ -0.9
HMGXB4-204ENST00000455359 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
HMGXB4-204ENST00000455359 Q8N814 137 aa9.44□□□□□ -0.9
HMGXB4-204ENST00000455359 NTN5Q8WTR8 489 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-204ENST00000455359 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
HMGXB4-204ENST00000455359 LINC00242Q5T6M2 205 aa9.43□□□□□ -0.9
HMGXB4-204ENST00000455359 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
HMGXB4-204ENST00000455359 PACRGQ96M98 296 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-204ENST00000455359 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
HMGXB4-204ENST00000455359 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
HMGXB4-204ENST00000455359 USP17L23D6RBM5 183 aa9.42□□□□□ -0.9
HMGXB4-204ENST00000455359 COX7A2LO14548 114 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms