RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 DEFB130AP0DP74 79 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 GCSHP23434 173 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 GAGE1Q13065 139 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 GAGE4Q13068 117 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 GAGE5Q13069 117 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 GAGE13Q4V321 117 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 SFTA2Q6UW10 78 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 LEPROTO15243 131 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 SMCPP49901 116 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 HSD52Q0P140 79 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 ANKRD39Q53RE8 183 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 ICOSQ9Y6W8 199 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 TMEM223A0PJW6 202 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 GYPEP15421 78 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 UBE2D1P51668 147 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 EMP1P54849 157 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 AMMECR1LQ6DCA0 310 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 NTM-AS1Q6ZSK4 140 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 CHAC1Q9BUX1 264 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 CDC42SE2Q9NRR3 84 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 MAJINQ3KP22 176 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 STPG4Q8N801 248 aa4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-210ENST00000454859 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 MYMXA0A1B0GTQ4 84 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 G3V4G9 280 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 CTAG1AP78358 180 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 Q6ZVH6 145 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 PHLDA1Q8WV24 401 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 FAM104AQ969W3 186 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 LELP1Q5T871 98 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 VSIG2Q96IQ7 327 aa4.78□□□□□ -1.64
ECHDC1-210ENST00000454859 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 IGKV2-29A2NJV5 120 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 TIMM17BO60830 172 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 C12orf74Q32Q52 190 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 C15orf53Q8NAA6 179 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 IGHV3-38A0A0C4DH36 116 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A0J9YXY3 114 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 A6NDN8 102 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 LGALS3P17931 250 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 Q6ZUT4 128 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 C2orf91Q6ZV80 131 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 SNHG12Q9BXW3 62 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 Q9UF83 564 aa4.77□□□□□ -1.65
ECHDC1-210ENST00000454859 F5H768 121 aa4.76□□□□□ -1.65
ECHDC1-210ENST00000454859 J3QQQ9 107 aa4.76□□□□□ -1.65
ECHDC1-210ENST00000454859 CHCHD5Q9BSY4 110 aa4.76□□□□□ -1.65
ECHDC1-210ENST00000454859 VWFP04275 2813 aa4.76□□□□□ -1.65
ECHDC1-210ENST00000454859 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A0J9YXV3 536 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 IGKV2D-26A0A0A0MRZ7 120 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 TRAV10A0A0B4J240 114 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 TRAV8-6A0A0B4J262 113 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 TMEM238LA0A1B0GVL6 79 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 A6NJY4 79 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 K7EIL1 84 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 K7EP13 123 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 HERV-K104P63124 156 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 SS18Q15532 418 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 BVES-AS1Q5T3Y7 98 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 LINC00528Q8N1L1 170 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
ECHDC1-210ENST00000454859 COL6A5A8TX70 2615 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 ZNF815PA8K554 130 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 LINC00242Q5T6M2 205 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 ZFAND6Q6FIF0 208 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 ORAOV1Q8WV07 137 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 STAB1Q9NY15 2570 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 LINC00469Q8N7U9 141 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 MUC7Q8TAX7 377 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 OPRPNQ99935 248 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 B9D2Q9BPU9 175 aa4.74□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A096LPF7 62 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 TRAV8-4A0A0B4J246 113 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 NDUFA1O15239 70 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 IGHV3-30-3P0DP02 117 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 PTTG1IPP53801 180 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A087WZ39 114 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 F8WDY8 70 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 IFITM1P13164 125 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 TCTAP57738 103 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 RBX1P62877 108 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 GAGE6Q13070 117 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms