RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PFN2P35080 140 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 RCVRNP35243 200 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 ZNF80P51504 273 aaPredicted RBP2.56□□□□□ -2
SBDSP1-204ENST00000453858 TRAM1Q15629 374 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 TMEM97Q5BJF2 176 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 PDZD11Q5EBL8 140 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 GCSAMLQ5JQS6 135 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 OR5H6Q8NGV6 325 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 ENKURQ8TC29 256 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 ORC6Q9Y5N6 252 aa2.56□□□□□ -2
SBDSP1-204ENST00000453858 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
SBDSP1-204ENST00000453858 TRBV25-1A0A075B6N4 114 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 A0A0B4J2A0 478 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 C19orf71A6NCJ1 209 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 PYYP10082 97 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 SULT1A2P50226 295 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 S100A10P60903 97 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 SLC38A11Q08AI6 406 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 MLLT11Q13015 90 aaPredicted RBP2.55□□□□□ -2
SBDSP1-204ENST00000453858 SMCO1Q147U7 214 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 C10orf113Q5VZT2 155 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 ZFAND1Q8TCF1 268 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 SFRP2Q96HF1 295 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 SPANXB1Q9NS25 103 aaPredicted RBP2.55□□□□□ -2
SBDSP1-204ENST00000453858 SHPKQ9UHJ6 478 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 PSG8Q9UQ74 426 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 TIMM9Q9Y5J7 89 aa2.55□□□□□ -2
SBDSP1-204ENST00000453858 IGHV1-24A0A0C4DH33 117 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 AGPAT2O15120 278 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 IAPPP10997 89 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 CSN1S1P47710 185 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 CEND1Q8N111 149 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 OR5A1Q8NGJ0 315 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 OR51S1Q8NGJ8 323 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 PACRGQ96M98 296 aaPredicted RBP2.54□□□□□ -2
SBDSP1-204ENST00000453858 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
SBDSP1-204ENST00000453858 MED28Q9H204 178 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 NDUFA12Q9UI09 145 aa2.54□□□□□ -2
SBDSP1-204ENST00000453858 FAM240AA0A1B0GVK7 77 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 F6UZH7 168 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 RAB3DO95716 219 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 RAB14P61106 215 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 FAM74A4Q5TZK3 123 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 C1orf146Q5VVC0 180 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 MRPL55Q7Z7F7 128 aaKnown RBP2.53□□□□□ -2
SBDSP1-204ENST00000453858 NKAPP1Q8N9T2 125 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 FAM167A-AS1Q96KT0 104 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 MND1Q9BWT6 205 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 COPZ2Q9P299 210 aa2.53□□□□□ -2
SBDSP1-204ENST00000453858 PAIP2BQ9ULR5 123 aaKnown RBP2.53□□□□□ -2
SBDSP1-204ENST00000453858 IGKV3OR2-268A0A0C4DH90 116 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 FNDC10F2Z333 226 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 ATP6V1G2O95670 118 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 PVALBP20472 110 aaPredicted RBP2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 XCL1P47992 114 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 RAB4BP61018 213 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 RPL37P61927 97 aaKnown RBP2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 RPS29P62273 56 aaKnown RBP2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 Q6ZVH6 145 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 LYZL2Q7Z4W2 148 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 AKAP14Q86UN6 197 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 ZFP82Q8N141 532 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 FAM19A2Q8N3H0 131 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 OR2D3Q8NGH3 330 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 MGST2Q99735 147 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 MRPS26Q9BYN8 205 aaKnown RBP2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 SLIRPQ9GZT3 109 aaKnown RBP2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 IL36BQ9NZH7 164 aa2.52□□□□□ -2.01
SBDSP1-204ENST00000453858 IGHV3OR16-9A0A0B4J2B5 98 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 TINCRA0A1B0GVN0 87 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 C20orf202A1L168 122 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 C9orf92A6NGG3 77 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 SLC25A20O43772 301 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 SSNA1O43805 119 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 UPK1BO75841 260 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 SNAPINO95295 136 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 NBEAP1P0C6P0 100 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 AKR1C4P17516 323 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 BTCP35070 178 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 SPANXN5Q5MJ07 72 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 PLEKHB2Q96CS7 222 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 FXYD5Q96DB9 178 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 MRAP2Q96G30 205 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 TMEM243Q9BU79 118 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 ZNF471Q9BX82 626 aaPredicted RBP2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
SBDSP1-204ENST00000453858 TRDV1A0A1B0GX56 115 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 TMEM238C9JI98 176 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 FGF7P21781 194 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 MYL9P24844 172 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 RANP62826 216 aaKnown RBP2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 BAXQ07812 192 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 KIAA0087Q14695 138 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 DNLZQ5SXM8 178 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 TEX43Q6ZNM6 134 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 TERB2Q8NHR7 220 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 STOML3Q8TAV4 291 aa2.5□□□□□ -2.01
SBDSP1-204ENST00000453858 PRRT1Q99946 306 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms