RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 KMT2AQ03164 3969 aa9.74□□□□□ -0.85
NCKIPSD-207ENST00000453349 RYR3Q15413 4870 aa9.74□□□□□ -0.85
NCKIPSD-207ENST00000453349 COLCA2A8K830 154 aa9.73□□□□□ -0.85
NCKIPSD-207ENST00000453349 SCO1O75880 301 aa9.73□□□□□ -0.85
NCKIPSD-207ENST00000453349 SPANXA1Q9NS26 97 aa9.73□□□□□ -0.85
NCKIPSD-207ENST00000453349 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
NCKIPSD-207ENST00000453349 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
NCKIPSD-207ENST00000453349 C18orf32Q8TCD1 76 aa9.72□□□□□ -0.85
NCKIPSD-207ENST00000453349 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
NCKIPSD-207ENST00000453349 A0A087WTM6 91 aa9.71□□□□□ -0.86
NCKIPSD-207ENST00000453349 TRGC2P03986 189 aa9.71□□□□□ -0.86
NCKIPSD-207ENST00000453349 LINC00614P0C842 121 aa9.71□□□□□ -0.86
NCKIPSD-207ENST00000453349 RAB5BP61020 215 aa9.71□□□□□ -0.86
NCKIPSD-207ENST00000453349 SS18Q15532 418 aa9.71□□□□□ -0.86
NCKIPSD-207ENST00000453349 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.86
NCKIPSD-207ENST00000453349 LINC00959A0A1B0GUT2 108 aa9.7□□□□□ -0.86
NCKIPSD-207ENST00000453349 A0A1B0GVY2 172 aa9.7□□□□□ -0.86
NCKIPSD-207ENST00000453349 LRCOL1A6NCL2 159 aa9.7□□□□□ -0.86
NCKIPSD-207ENST00000453349 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
NCKIPSD-207ENST00000453349 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
NCKIPSD-207ENST00000453349 BAALCQ8WXS3 180 aa9.7□□□□□ -0.86
NCKIPSD-207ENST00000453349 LINC01549A6NIU2 74 aa9.69□□□□□ -0.86
NCKIPSD-207ENST00000453349 CCL25O15444 150 aa9.69□□□□□ -0.86
NCKIPSD-207ENST00000453349 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
NCKIPSD-207ENST00000453349 MAPKAPK5-AS1Q8N8E1 139 aa9.69□□□□□ -0.86
NCKIPSD-207ENST00000453349 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
NCKIPSD-207ENST00000453349 Q6ZUT4 128 aa9.68□□□□□ -0.86
NCKIPSD-207ENST00000453349 CHCHD10Q8WYQ3 142 aaPredicted RBP9.68□□□□□ -0.86
NCKIPSD-207ENST00000453349 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
NCKIPSD-207ENST00000453349 AP5S1Q9NUS5 200 aa9.68□□□□□ -0.86
NCKIPSD-207ENST00000453349 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 C1orf196B1AJZ1 125 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 NPSP0C0P6 89 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 Q6ZN92 141 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
NCKIPSD-207ENST00000453349 DNAH6Q9C0G6 4158 aa9.66□□□□□ -0.86
NCKIPSD-207ENST00000453349 TRAV13-1A0A0B4J241 112 aa9.66□□□□□ -0.86
NCKIPSD-207ENST00000453349 LECT2O14960 151 aa9.66□□□□□ -0.86
NCKIPSD-207ENST00000453349 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
NCKIPSD-207ENST00000453349 Q8N814 137 aa9.66□□□□□ -0.86
NCKIPSD-207ENST00000453349 SCGB3A1Q96QR1 104 aa9.66□□□□□ -0.86
NCKIPSD-207ENST00000453349 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 IGIPA6NJ69 53 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 XCL1P47992 114 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 C14orf177Q52M58 125 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 TEX43Q6ZNM6 134 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 ERASQ7Z444 233 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 FAM104AQ969W3 186 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 VCX2Q9H322 139 aa9.65□□□□□ -0.86
NCKIPSD-207ENST00000453349 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
NCKIPSD-207ENST00000453349 CFAP161Q6P656 301 aa9.64□□□□□ -0.87
NCKIPSD-207ENST00000453349 CHCHD1Q96BP2 118 aaKnown RBP9.64□□□□□ -0.87
NCKIPSD-207ENST00000453349 URB1-AS1Q96HZ7 61 aa9.64□□□□□ -0.87
NCKIPSD-207ENST00000453349 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
NCKIPSD-207ENST00000453349 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
NCKIPSD-207ENST00000453349 USP17L23D6RBM5 183 aa9.63□□□□□ -0.87
NCKIPSD-207ENST00000453349 WFDC2Q14508 124 aa9.63□□□□□ -0.87
NCKIPSD-207ENST00000453349 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
NCKIPSD-207ENST00000453349 HBDP02042 147 aa9.62□□□□□ -0.87
NCKIPSD-207ENST00000453349 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
NCKIPSD-207ENST00000453349 FOXI1Q12951 378 aa9.62□□□□□ -0.87
NCKIPSD-207ENST00000453349 CDPF1Q6NVV7 123 aa9.62□□□□□ -0.87
NCKIPSD-207ENST00000453349 NTN5Q8WTR8 489 aaPredicted RBP9.62□□□□□ -0.87
NCKIPSD-207ENST00000453349 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
NCKIPSD-207ENST00000453349 PMCHL1Q16048 86 aa9.61□□□□□ -0.87
NCKIPSD-207ENST00000453349 AMELXQ99217 191 aa9.61□□□□□ -0.87
NCKIPSD-207ENST00000453349 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.6□□□□□ -0.87
NCKIPSD-207ENST00000453349 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
NCKIPSD-207ENST00000453349 C16orf90A8MZG2 172 aa9.6□□□□□ -0.87
NCKIPSD-207ENST00000453349 HSBP1O75506 76 aa9.6□□□□□ -0.87
NCKIPSD-207ENST00000453349 COX7A2LO14548 114 aa9.59□□□□□ -0.87
NCKIPSD-207ENST00000453349 MALP21145 153 aa9.59□□□□□ -0.87
NCKIPSD-207ENST00000453349 A0A096LNJ9 63 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 hDV102S1A0JD36 115 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 ATP5LO75964 103 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 PRSS1P07477 247 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 UBE2D1P51668 147 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 SEC11AP67812 179 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
NCKIPSD-207ENST00000453349 IGHV1-58A0A0C4DH39 117 aa9.57□□□□□ -0.88
NCKIPSD-207ENST00000453349 APOMO95445 188 aa9.57□□□□□ -0.88
NCKIPSD-207ENST00000453349 PDZD11Q5EBL8 140 aa9.57□□□□□ -0.88
NCKIPSD-207ENST00000453349 LINC00242Q5T6M2 205 aa9.57□□□□□ -0.88
NCKIPSD-207ENST00000453349 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
NCKIPSD-207ENST00000453349 SERF1AO75920 110 aa9.56□□□□□ -0.88
NCKIPSD-207ENST00000453349 GCSHP23434 173 aa9.56□□□□□ -0.88
NCKIPSD-207ENST00000453349 NDUFA6P56556 154 aa9.56□□□□□ -0.88
NCKIPSD-207ENST00000453349 PMVKQ15126 192 aa9.56□□□□□ -0.88
NCKIPSD-207ENST00000453349 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
NCKIPSD-207ENST00000453349 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BKO60814 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BJP06899 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BOP23527 126 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms