RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 VCX2Q9H322 139 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 CRYBA4P53673 196 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 PHLDA1Q8WV24 401 aaPredicted RBP7.63□□□□□ -1.19
PKP4-206ENST00000452162 SPANXA1Q9NS26 97 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 IGHV3-38A0A0C4DH36 116 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
PKP4-206ENST00000452162 PLEKHB2Q96CS7 222 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 B9D2Q9BPU9 175 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
PKP4-206ENST00000452162 UBE2D4Q9Y2X8 147 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 TENM3Q9P273 2699 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 A0A0J9YXV3 536 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 TMEM223A0PJW6 202 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 SMIM13P0DJ93 91 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
PKP4-206ENST00000452162 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
PKP4-206ENST00000452162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
PKP4-206ENST00000452162 TRBV10-1A0A0K0K1A3 114 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
PKP4-206ENST00000452162 A8MZ25 164 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 K7EQD1 137 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 OCIAD2Q56VL3 154 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 SBSPONQ8IVN8 264 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 RAB37Q96AX2 223 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 OVOL2Q9BRP0 275 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 H3BUT2 72 aa7.61□□□□□ -1.19
PKP4-206ENST00000452162 K7ERJ3 54 aa7.6□□□□□ -1.19
PKP4-206ENST00000452162 MRPS36P82909 103 aaKnown RBP7.6□□□□□ -1.19
PKP4-206ENST00000452162 RRN3P1Q2M238 152 aa7.6□□□□□ -1.19
PKP4-206ENST00000452162 NHP2Q9NX24 153 aaKnown RBP7.6□□□□□ -1.19
PKP4-206ENST00000452162 A0A1B0GV72 72 aa7.6□□□□□ -1.19
PKP4-206ENST00000452162 J3QQQ9 107 aa7.6□□□□□ -1.19
PKP4-206ENST00000452162 LEPROTO15243 131 aa7.6□□□□□ -1.19
PKP4-206ENST00000452162 SLC25A29Q8N8R3 303 aa7.6□□□□□ -1.19
PKP4-206ENST00000452162 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
PKP4-206ENST00000452162 A0A0J9YY99 117 aa7.59□□□□□ -1.19
PKP4-206ENST00000452162 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
PKP4-206ENST00000452162 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
PKP4-206ENST00000452162 Q6ZUT4 128 aa7.59□□□□□ -1.19
PKP4-206ENST00000452162 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
PKP4-206ENST00000452162 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
PKP4-206ENST00000452162 TIMM21Q9BVV7 248 aa7.59□□□□□ -1.19
PKP4-206ENST00000452162 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
PKP4-206ENST00000452162 A0A1B0GWB2 263 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 GAGE12BA1L429 117 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 GAGE7O76087 117 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 GAGE12FP0CL80 117 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 GAGE12GP0CL81 117 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 GAGE12IP0CL82 117 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 UBE2D3P61077 147 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 UBE2D2P62837 147 aa7.59□□□□□ -1.2
PKP4-206ENST00000452162 RNASE13Q5GAN3 156 aaKnown RBP7.59□□□□□ -1.2
PKP4-206ENST00000452162 STAB2Q8WWQ8 2551 aa7.58□□□□□ -1.2
PKP4-206ENST00000452162 A0A1W2PPM0 123 aa7.58□□□□□ -1.2
PKP4-206ENST00000452162 DAZ4Q86SG3 579 aaKnown RBP7.58□□□□□ -1.2
PKP4-206ENST00000452162 DAZ3Q9NR90 486 aaKnown RBP7.58□□□□□ -1.2
PKP4-206ENST00000452162 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
PKP4-206ENST00000452162 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
PKP4-206ENST00000452162 TRGV2A0A075B6R0 118 aa7.57□□□□□ -1.2
PKP4-206ENST00000452162 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
PKP4-206ENST00000452162 K7EP34 96 aa7.57□□□□□ -1.2
PKP4-206ENST00000452162 NTM-AS1Q6ZSK4 140 aa7.57□□□□□ -1.2
PKP4-206ENST00000452162 SPANXB1Q9NS25 103 aaPredicted RBP7.57□□□□□ -1.2
PKP4-206ENST00000452162 TRAV26-1A0A087WT03 109 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 GAGE12JA6NER3 117 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 GAGE10A6NGK3 116 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 GAGE4Q13068 117 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 GAGE5Q13069 117 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 GAGE13Q4V321 117 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 TRBV6-4A0A1B0GX49 114 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 UBE2D1P51668 147 aa7.56□□□□□ -1.2
PKP4-206ENST00000452162 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 GTF2H5Q6ZYL4 71 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 TM2D3Q9BRN9 247 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 IGLL5B9A064 214 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
PKP4-206ENST00000452162 IGHV3-30-3P0DP02 117 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 SRSF9Q13242 221 aaKnown RBP eCLIP7.55□□□□□ -1.2
PKP4-206ENST00000452162 RETNQ9HD89 108 aa7.55□□□□□ -1.2
PKP4-206ENST00000452162 LOC100131303A0A0U1RQF7 123 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 K7ERU9 68 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 FABP2P12104 132 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 FHL2Q14192 279 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 LINC00612Q8N6U2 182 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 GTSF1LQ9H1H1 148 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
PKP4-206ENST00000452162 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 A4D1N5 150 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 IGHV3-30P01768 117 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 IGHV3-30-5P0DP03 117 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 KIR2DL5BQ8NHK3 375 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 X6R8D5 127 aa7.54□□□□□ -1.2
PKP4-206ENST00000452162 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 TRGV4A0A0C4DH28 118 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 TIRAPP58753 221 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms