RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	CNBP	P62633	177 aa	Known RBP	10.21	□□□□□ -0.77
HDLBP-223	ENST00000449864	MRPL52	Q86TS9	123 aa	Known RBP	10.21	□□□□□ -0.77
HDLBP-223	ENST00000449864	CIRBP-AS1	Q8TBR5	109 aa		10.21	□□□□□ -0.77
HDLBP-223	ENST00000449864	VPS13B	Q7Z7G8	4022 aa		10.2	□□□□□ -0.78
HDLBP-223	ENST00000449864	LINC00862	A6NCI5	91 aa		10.2	□□□□□ -0.78
HDLBP-223	ENST00000449864	XCL1	P47992	114 aa		10.2	□□□□□ -0.78
HDLBP-223	ENST00000449864	SMAGP	Q0VAQ4	97 aa		10.2	□□□□□ -0.78
HDLBP-223	ENST00000449864	PNRC1	Q12796	327 aa	Predicted RBP	10.2	□□□□□ -0.78
HDLBP-223	ENST00000449864	C15orf56	Q8N910	161 aa		10.2	□□□□□ -0.78
HDLBP-223	ENST00000449864	DNAH8	Q96JB1	4490 aa		10.19	□□□□□ -0.78
HDLBP-223	ENST00000449864	IGHV3-64	A0A075B6Q5	118 aa		10.19	□□□□□ -0.78
HDLBP-223	ENST00000449864		A0A1B0GXF2	115 aa		10.19	□□□□□ -0.78
HDLBP-223	ENST00000449864	HIGD2B	Q4VC39	106 aa		10.19	□□□□□ -0.78
HDLBP-223	ENST00000449864	C20orf78	Q9BR46	151 aa		10.19	□□□□□ -0.78
HDLBP-223	ENST00000449864	LINC00959	A0A1B0GUT2	108 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864		D6R8Y8	96 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	CCL25	O15444	150 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	SS18	Q15532	418 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	ATP5L2	Q7Z4Y8	100 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	ZNF664	Q8N3J9	261 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	CDC42SE2	Q9NRR3	84 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	FAT1	Q14517	4588 aa		10.18	□□□□□ -0.78
HDLBP-223	ENST00000449864	TNFRSF6B	O95407	300 aa		10.17	□□□□□ -0.78
HDLBP-223	ENST00000449864	MT-ND4L	P03901	98 aa		10.17	□□□□□ -0.78
HDLBP-223	ENST00000449864	FOXI1	Q12951	378 aa		10.17	□□□□□ -0.78
HDLBP-223	ENST00000449864	CLLU1	Q5K131	121 aa		10.17	□□□□□ -0.78
HDLBP-223	ENST00000449864	TMEM18	Q96B42	140 aa		10.17	□□□□□ -0.78
HDLBP-223	ENST00000449864	SMIM2	Q9BVW6	85 aa		10.17	□□□□□ -0.78
HDLBP-223	ENST00000449864	FLG2	Q5D862	2391 aa	Predicted RBP	10.16	□□□□□ -0.78
HDLBP-223	ENST00000449864	TRBV24-1	A0A075B6N3	115 aa		10.16	□□□□□ -0.78
HDLBP-223	ENST00000449864	TCAP	O15273	167 aa		10.16	□□□□□ -0.78
HDLBP-223	ENST00000449864	PPBP	P02775	128 aa		10.16	□□□□□ -0.78
HDLBP-223	ENST00000449864	SDIM1	Q6ZPB5	146 aa		10.16	□□□□□ -0.78
HDLBP-223	ENST00000449864	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.16	□□□□□ -0.78
HDLBP-223	ENST00000449864	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.15	□□□□□ -0.78
HDLBP-223	ENST00000449864	RPL32	P62910	135 aa	Known RBP	10.15	□□□□□ -0.78
HDLBP-223	ENST00000449864	ANAPC16	Q96DE5	110 aa		10.15	□□□□□ -0.78
HDLBP-223	ENST00000449864	UBE2D4	Q9Y2X8	147 aa		10.15	□□□□□ -0.78
HDLBP-223	ENST00000449864	NPY	P01303	97 aa		10.14	□□□□□ -0.79
HDLBP-223	ENST00000449864	SLPI	P03973	132 aa		10.14	□□□□□ -0.79
HDLBP-223	ENST00000449864	RNASE13	Q5GAN3	156 aa	Known RBP	10.14	□□□□□ -0.79
HDLBP-223	ENST00000449864	ORMDL3	Q8N138	153 aa		10.14	□□□□□ -0.79
HDLBP-223	ENST00000449864	CSDC2	Q9Y534	153 aa	Known RBP	10.14	□□□□□ -0.79
HDLBP-223	ENST00000449864	IGHV1-58	A0A0C4DH39	117 aa		10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864	PANO1	I0J062	215 aa		10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864	PHOX2A	O14813	284 aa		10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864	CD164L2	Q6UWJ8	174 aa		10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864		Q6ZUT4	128 aa		10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864	TIMM21	Q9BVV7	248 aa		10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.13	□□□□□ -0.79
HDLBP-223	ENST00000449864	C1orf196	B1AJZ1	125 aa		10.12	□□□□□ -0.79
HDLBP-223	ENST00000449864	DPH3	Q96FX2	82 aa		10.12	□□□□□ -0.79
HDLBP-223	ENST00000449864	PRELID3A	Q96N28	172 aa		10.12	□□□□□ -0.79
HDLBP-223	ENST00000449864	RPL39	P62891	51 aa	Known RBP	10.11	□□□□□ -0.79
HDLBP-223	ENST00000449864	TMEM136	Q6ZRR5	245 aa		10.11	□□□□□ -0.79
HDLBP-223	ENST00000449864	TRAV13-1	A0A0B4J241	112 aa		10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	CHTF8	P0CG12	524 aa		10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	RAB5A	P20339	215 aa		10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	MAL	P21145	153 aa		10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	RPL37A	P61513	92 aa	Known RBP	10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	CIRBP	Q14011	172 aa	Known RBP	10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	UQCC3	Q6UW78	93 aa		10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	SPANXA1	Q9NS26	97 aa		10.1	□□□□□ -0.79
HDLBP-223	ENST00000449864	ZNF561-AS1	K7EIQ3	104 aa		10.09	□□□□□ -0.79
HDLBP-223	ENST00000449864	COX7A2L	O14548	114 aa		10.09	□□□□□ -0.79
HDLBP-223	ENST00000449864	COX6A2	Q02221	97 aa		10.09	□□□□□ -0.79
HDLBP-223	ENST00000449864	SPACA4	Q8TDM5	124 aa		10.09	□□□□□ -0.79
HDLBP-223	ENST00000449864	IFITM2	Q01629	132 aa		10.08	□□□□□ -0.8
HDLBP-223	ENST00000449864	LINC00526	Q96FQ7	95 aa		10.08	□□□□□ -0.8
HDLBP-223	ENST00000449864	CARD19	Q96LW7	228 aa		10.08	□□□□□ -0.8
HDLBP-223	ENST00000449864	MAP1LC3A	Q9H492	121 aa		10.08	□□□□□ -0.8
HDLBP-223	ENST00000449864	PKIG	Q9Y2B9	76 aa		10.08	□□□□□ -0.8
HDLBP-223	ENST00000449864	LAMTOR2	Q9Y2Q5	125 aa		10.08	□□□□□ -0.8
HDLBP-223	ENST00000449864	IGKV2-24	A0A0C4DH68	120 aa		10.07	□□□□□ -0.8
HDLBP-223	ENST00000449864	KRTAP10-4	P60372	401 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-223	ENST00000449864		A0A087WYN8	130 aa		10.06	□□□□□ -0.8
HDLBP-223	ENST00000449864	LOC389332	A0A1B0GUA5	103 aa		10.06	□□□□□ -0.8
HDLBP-223	ENST00000449864	TMEM218	A2RU14	115 aa		10.06	□□□□□ -0.8
HDLBP-223	ENST00000449864		J3QL48	77 aa		10.06	□□□□□ -0.8
HDLBP-223	ENST00000449864	ADCYAP1	P18509	176 aa		10.06	□□□□□ -0.8
HDLBP-223	ENST00000449864	PRSS3P2	Q8NHM4	247 aa		10.06	□□□□□ -0.8
HDLBP-223	ENST00000449864	MYCBP2	O75592	4640 aa		10.05	□□□□□ -0.8
HDLBP-223	ENST00000449864	IFITM10	A6NMD0	228 aa		10.05	□□□□□ -0.8
HDLBP-223	ENST00000449864	IFI27	P40305	119 aa	Predicted RBP	10.05	□□□□□ -0.8
HDLBP-223	ENST00000449864	SYCN	Q0VAF6	134 aa		10.05	□□□□□ -0.8
HDLBP-223	ENST00000449864	MAJIN	Q3KP22	176 aa		10.05	□□□□□ -0.8
HDLBP-223	ENST00000449864	CTDSP1	Q9GZU7	261 aa		10.05	□□□□□ -0.8
HDLBP-223	ENST00000449864	APOM	O95445	188 aa		10.04	□□□□□ -0.8
HDLBP-223	ENST00000449864	MRPS36	P82909	103 aa	Known RBP	10.04	□□□□□ -0.8
HDLBP-223	ENST00000449864	C5orf38	Q86SI9	138 aa		10.04	□□□□□ -0.8
HDLBP-223	ENST00000449864	COMMD7	Q86VX2	200 aa		10.04	□□□□□ -0.8
HDLBP-223	ENST00000449864	IMMP2L	Q96T52	175 aa		10.04	□□□□□ -0.8
HDLBP-223	ENST00000449864	OPRPN	Q99935	248 aa	Predicted RBP	10.04	□□□□□ -0.8
HDLBP-223	ENST00000449864	IGLV4-69	A0A075B6H9	119 aa		10.03	□□□□□ -0.8
HDLBP-223	ENST00000449864		A0A096LNI7	61 aa		10.03	□□□□□ -0.8
HDLBP-223	ENST00000449864	PLAC8	Q9NZF1	115 aa		10.03	□□□□□ -0.8
HDLBP-223	ENST00000449864	PRSS47	A8MTI9	375 aa		10.02	□□□□□ -0.81
HDLBP-223	ENST00000449864	STPG4	Q8N801	248 aa		10.02	□□□□□ -0.81
HDLBP-223	ENST00000449864		Q8N8P6	123 aa		10.02	□□□□□ -0.81
HDLBP-223	ENST00000449864	CAMK2N2	Q96S95	79 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms