RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ESDP10768 282 aa13.3□□□□□ -0.28
VSX1-206ENST00000444511 LINC00959A0A1B0GUT2 108 aa13.29□□□□□ -0.28
VSX1-206ENST00000444511 ZNF727A8MUV8 499 aa13.29□□□□□ -0.28
VSX1-206ENST00000444511 PHOX2AO14813 284 aa13.29□□□□□ -0.28
VSX1-206ENST00000444511 OSTCQ9NRP0 149 aa13.29□□□□□ -0.28
VSX1-206ENST00000444511 IGHV1-58A0A0C4DH39 117 aa13.27□□□□□ -0.29
VSX1-206ENST00000444511 RAB4AP20338 218 aa13.27□□□□□ -0.29
VSX1-206ENST00000444511 POLR2KP53803 58 aaKnown RBP13.27□□□□□ -0.29
VSX1-206ENST00000444511 SS18Q15532 418 aa13.27□□□□□ -0.29
VSX1-206ENST00000444511 AMN1Q8IY45 258 aa13.27□□□□□ -0.29
VSX1-206ENST00000444511 STPG4Q8N801 248 aa13.27□□□□□ -0.29
VSX1-206ENST00000444511 TRBV27A0A0K0K1C4 114 aa13.26□□□□□ -0.29
VSX1-206ENST00000444511 C7orf77A4D0Y5 90 aa13.26□□□□□ -0.29
VSX1-206ENST00000444511 MT1HL1P0DM35 61 aa13.26□□□□□ -0.29
VSX1-206ENST00000444511 MRPL52Q86TS9 123 aaKnown RBP13.26□□□□□ -0.29
VSX1-206ENST00000444511 PKIGQ9Y2B9 76 aa13.26□□□□□ -0.29
VSX1-206ENST00000444511 SRP19P09132 144 aaKnown RBP13.25□□□□□ -0.29
VSX1-206ENST00000444511 RIGQ13278 110 aa13.25□□□□□ -0.29
VSX1-206ENST00000444511 CDC42SE2Q9NRR3 84 aa13.25□□□□□ -0.29
VSX1-206ENST00000444511 A0A096LNI7 61 aa13.24□□□□□ -0.29
VSX1-206ENST00000444511 FCER1GP30273 86 aa13.24□□□□□ -0.29
VSX1-206ENST00000444511 ZNF664Q8N3J9 261 aa13.24□□□□□ -0.29
VSX1-206ENST00000444511 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
VSX1-206ENST00000444511 SMKR1H3BMG3 65 aa13.23□□□□□ -0.29
VSX1-206ENST00000444511 VCYO14598 125 aa13.23□□□□□ -0.29
VSX1-206ENST00000444511 CD164L2Q6UWJ8 174 aa13.23□□□□□ -0.29
VSX1-206ENST00000444511 CARD19Q96LW7 228 aa13.23□□□□□ -0.29
VSX1-206ENST00000444511 LINC00474Q9P2X8 69 aa13.23□□□□□ -0.29
VSX1-206ENST00000444511 V9GYV3 84 aa13.23□□□□□ -0.29
VSX1-206ENST00000444511 ZNF561-AS1K7EIQ3 104 aa13.22□□□□□ -0.29
VSX1-206ENST00000444511 PPP1R17O96001 155 aa13.22□□□□□ -0.29
VSX1-206ENST00000444511 NUP35Q8NFH5 326 aa13.22□□□□□ -0.29
VSX1-206ENST00000444511 PRR3P79522 188 aaKnown RBP13.2□□□□□ -0.3
VSX1-206ENST00000444511 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
VSX1-206ENST00000444511 TMEM241Q24JQ0 296 aa13.2□□□□□ -0.3
VSX1-206ENST00000444511 ISOC2Q96AB3 205 aa13.2□□□□□ -0.3
VSX1-206ENST00000444511 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
VSX1-206ENST00000444511 SUMO2P61956 95 aaKnown RBP13.19□□□□□ -0.3
VSX1-206ENST00000444511 SYCNQ0VAF6 134 aa13.19□□□□□ -0.3
VSX1-206ENST00000444511 NRACQ8N912 160 aa13.19□□□□□ -0.3
VSX1-206ENST00000444511 KIR2DL4Q99706 377 aa13.19□□□□□ -0.3
VSX1-206ENST00000444511 C1orf196B1AJZ1 125 aa13.18□□□□□ -0.3
VSX1-206ENST00000444511 MALP21145 153 aa13.18□□□□□ -0.3
VSX1-206ENST00000444511 FAM74A3Q4VXF1 159 aa13.18□□□□□ -0.3
VSX1-206ENST00000444511 PPP1R2P9O14990 202 aa13.17□□□□□ -0.3
VSX1-206ENST00000444511 CAMPP49913 170 aa13.17□□□□□ -0.3
VSX1-206ENST00000444511 RPL23P62829 140 aaKnown RBP13.17□□□□□ -0.3
VSX1-206ENST00000444511 ADIRFQ15847 76 aa13.17□□□□□ -0.3
VSX1-206ENST00000444511 UBE2D4Q9Y2X8 147 aa13.17□□□□□ -0.3
VSX1-206ENST00000444511 CSDC2Q9Y534 153 aaKnown RBP13.17□□□□□ -0.3
VSX1-206ENST00000444511 COX7A2LO14548 114 aa13.16□□□□□ -0.3
VSX1-206ENST00000444511 MRPL51Q4U2R6 128 aaKnown RBP13.15□□□□□ -0.3
VSX1-206ENST00000444511 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
VSX1-206ENST00000444511 FAM104BQ5XKR9 115 aa13.15□□□□□ -0.3
VSX1-206ENST00000444511 UBR4Q5T4S7 5183 aa13.14□□□□□ -0.31
VSX1-206ENST00000444511 IGLV4-69A0A075B6H9 119 aa13.14□□□□□ -0.31
VSX1-206ENST00000444511 TRAV13-1A0A0B4J241 112 aa13.14□□□□□ -0.31
VSX1-206ENST00000444511 TMEM18Q96B42 140 aa13.14□□□□□ -0.31
VSX1-206ENST00000444511 NAT8Q9UHE5 227 aa13.14□□□□□ -0.31
VSX1-206ENST00000444511 LOC107984640A0A0U1RRK4 108 aa13.12□□□□□ -0.31
VSX1-206ENST00000444511 SMIM27A0A1W2PRY6 76 aa13.12□□□□□ -0.31
VSX1-206ENST00000444511 LINC00862A6NCI5 91 aa13.12□□□□□ -0.31
VSX1-206ENST00000444511 Q6ZUT4 128 aa13.12□□□□□ -0.31
VSX1-206ENST00000444511 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
VSX1-206ENST00000444511 A0A1B0GW15 77 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 CKS2P33552 79 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 PTTG1IPP53801 180 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 LINC01600Q96MT4 127 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 CAMK2N2Q96S95 79 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 TIMM21Q9BVV7 248 aa13.11□□□□□ -0.31
VSX1-206ENST00000444511 C9JQL5 133 aa13.1□□□□□ -0.31
VSX1-206ENST00000444511 C5orf38Q86SI9 138 aa13.1□□□□□ -0.31
VSX1-206ENST00000444511 TCAPO15273 167 aa13.09□□□□□ -0.31
VSX1-206ENST00000444511 APOMO95445 188 aa13.09□□□□□ -0.31
VSX1-206ENST00000444511 PEA15Q15121 130 aa13.09□□□□□ -0.31
VSX1-206ENST00000444511 SPINK6Q6UWN8 80 aa13.09□□□□□ -0.31
VSX1-206ENST00000444511 Q6ZRP5 223 aa13.09□□□□□ -0.31
VSX1-206ENST00000444511 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.32
VSX1-206ENST00000444511 RPL32P62910 135 aaKnown RBP13.08□□□□□ -0.32
VSX1-206ENST00000444511 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
VSX1-206ENST00000444511 TNFRSF6BO95407 300 aa13.07□□□□□ -0.32
VSX1-206ENST00000444511 S100A8P05109 93 aa13.07□□□□□ -0.32
VSX1-206ENST00000444511 SRSF3P84103 164 aaKnown RBP13.07□□□□□ -0.32
VSX1-206ENST00000444511 REG3GQ6UW15 175 aa13.07□□□□□ -0.32
VSX1-206ENST00000444511 F8W036 122 aa13.06□□□□□ -0.32
VSX1-206ENST00000444511 RPL39P62891 51 aaKnown RBP13.06□□□□□ -0.32
VSX1-206ENST00000444511 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
VSX1-206ENST00000444511 MRPL54Q6P161 138 aaKnown RBP13.06□□□□□ -0.32
VSX1-206ENST00000444511 SMIM2Q9BVW6 85 aa13.06□□□□□ -0.32
VSX1-206ENST00000444511 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
VSX1-206ENST00000444511 D6R8Y8 96 aa13.05□□□□□ -0.32
VSX1-206ENST00000444511 HBBP68871 147 aa13.05□□□□□ -0.32
VSX1-206ENST00000444511 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
VSX1-206ENST00000444511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.04□□□□□ -0.32
VSX1-206ENST00000444511 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
VSX1-206ENST00000444511 SPANXA1Q9NS26 97 aa13.04□□□□□ -0.32
VSX1-206ENST00000444511 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
VSX1-206ENST00000444511 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
VSX1-206ENST00000444511 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms