RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 SLPIP03973 132 aa11.68□□□□□ -0.54
VCX3B-203ENST00000444481 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
VCX3B-203ENST00000444481 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
VCX3B-203ENST00000444481 NRACQ8N912 160 aa11.68□□□□□ -0.54
VCX3B-203ENST00000444481 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
VCX3B-203ENST00000444481 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
VCX3B-203ENST00000444481 S100A8P05109 93 aa11.67□□□□□ -0.54
VCX3B-203ENST00000444481 FCER1GP30273 86 aa11.67□□□□□ -0.54
VCX3B-203ENST00000444481 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
VCX3B-203ENST00000444481 CIRBPQ14011 172 aaKnown RBP11.67□□□□□ -0.54
VCX3B-203ENST00000444481 MRPL51Q4U2R6 128 aaKnown RBP11.67□□□□□ -0.54
VCX3B-203ENST00000444481 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
VCX3B-203ENST00000444481 CDC42SE2Q9NRR3 84 aa11.67□□□□□ -0.54
VCX3B-203ENST00000444481 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
VCX3B-203ENST00000444481 CAMPP49913 170 aa11.66□□□□□ -0.54
VCX3B-203ENST00000444481 FOXI1Q12951 378 aa11.66□□□□□ -0.54
VCX3B-203ENST00000444481 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
VCX3B-203ENST00000444481 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
VCX3B-203ENST00000444481 SS18Q15532 418 aa11.65□□□□□ -0.54
VCX3B-203ENST00000444481 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
VCX3B-203ENST00000444481 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
VCX3B-203ENST00000444481 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
VCX3B-203ENST00000444481 KRTAP29-1A8MX34 341 aaPredicted RBP11.64□□□□□ -0.55
VCX3B-203ENST00000444481 PANO1I0J062 215 aa11.64□□□□□ -0.55
VCX3B-203ENST00000444481 J3QL48 77 aa11.64□□□□□ -0.55
VCX3B-203ENST00000444481 XCL1P47992 114 aa11.64□□□□□ -0.55
VCX3B-203ENST00000444481 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
VCX3B-203ENST00000444481 F8W036 122 aa11.63□□□□□ -0.55
VCX3B-203ENST00000444481 TCAPO15273 167 aa11.63□□□□□ -0.55
VCX3B-203ENST00000444481 CCL25O15444 150 aa11.63□□□□□ -0.55
VCX3B-203ENST00000444481 CKS2P33552 79 aa11.63□□□□□ -0.55
VCX3B-203ENST00000444481 RPL37AP61513 92 aaKnown RBP11.63□□□□□ -0.55
VCX3B-203ENST00000444481 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
VCX3B-203ENST00000444481 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
VCX3B-203ENST00000444481 HBBP68871 147 aa11.62□□□□□ -0.55
VCX3B-203ENST00000444481 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
VCX3B-203ENST00000444481 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
VCX3B-203ENST00000444481 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
VCX3B-203ENST00000444481 UBE2D4Q9Y2X8 147 aa11.61□□□□□ -0.55
VCX3B-203ENST00000444481 A0A1B0GXF2 115 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 PPBPP02775 128 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 RAB14P61106 215 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 MRPL54Q6P161 138 aaKnown RBP11.6□□□□□ -0.55
VCX3B-203ENST00000444481 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 SPACA4Q8TDM5 124 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
VCX3B-203ENST00000444481 PHOX2AO14813 284 aa11.59□□□□□ -0.55
VCX3B-203ENST00000444481 COX6A2Q02221 97 aa11.59□□□□□ -0.55
VCX3B-203ENST00000444481 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
VCX3B-203ENST00000444481 A0A087WYN8 130 aa11.58□□□□□ -0.56
VCX3B-203ENST00000444481 PNRC1Q12796 327 aaPredicted RBP11.58□□□□□ -0.56
VCX3B-203ENST00000444481 D6R8Y8 96 aa11.57□□□□□ -0.56
VCX3B-203ENST00000444481 OXTP01178 125 aa11.57□□□□□ -0.56
VCX3B-203ENST00000444481 CHTF8P0CG12 524 aa11.57□□□□□ -0.56
VCX3B-203ENST00000444481 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
VCX3B-203ENST00000444481 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
VCX3B-203ENST00000444481 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
VCX3B-203ENST00000444481 ZNF561-AS1K7EIQ3 104 aa11.55□□□□□ -0.56
VCX3B-203ENST00000444481 ANAPC16Q96DE5 110 aa11.55□□□□□ -0.56
VCX3B-203ENST00000444481 COX7A2LO14548 114 aa11.54□□□□□ -0.56
VCX3B-203ENST00000444481 NPYP01303 97 aa11.54□□□□□ -0.56
VCX3B-203ENST00000444481 MT-ND4LP03901 98 aa11.54□□□□□ -0.56
VCX3B-203ENST00000444481 MALP21145 153 aa11.54□□□□□ -0.56
VCX3B-203ENST00000444481 ORMDL3Q8N138 153 aa11.54□□□□□ -0.56
VCX3B-203ENST00000444481 LINC00474Q9P2X8 69 aa11.54□□□□□ -0.56
VCX3B-203ENST00000444481 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
VCX3B-203ENST00000444481 TMEM136Q6ZRR5 245 aa11.53□□□□□ -0.56
VCX3B-203ENST00000444481 Q6ZUT4 128 aa11.53□□□□□ -0.56
VCX3B-203ENST00000444481 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
VCX3B-203ENST00000444481 SPANXA1Q9NS26 97 aa11.53□□□□□ -0.56
VCX3B-203ENST00000444481 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.57
VCX3B-203ENST00000444481 SYCNQ0VAF6 134 aa11.52□□□□□ -0.57
VCX3B-203ENST00000444481 MAJINQ3KP22 176 aa11.52□□□□□ -0.57
VCX3B-203ENST00000444481 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
VCX3B-203ENST00000444481 C7orf33Q8WU49 177 aa11.52□□□□□ -0.57
VCX3B-203ENST00000444481 RPL39P62891 51 aaKnown RBP11.51□□□□□ -0.57
VCX3B-203ENST00000444481 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
VCX3B-203ENST00000444481 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
VCX3B-203ENST00000444481 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
VCX3B-203ENST00000444481 LAMTOR2Q9Y2Q5 125 aa11.51□□□□□ -0.57
VCX3B-203ENST00000444481 LRP1Q07954 4544 aaKnown RBP11.5□□□□□ -0.57
VCX3B-203ENST00000444481 PRSS47A8MTI9 375 aa11.5□□□□□ -0.57
VCX3B-203ENST00000444481 APOMO95445 188 aa11.5□□□□□ -0.57
VCX3B-203ENST00000444481 RAB5AP20339 215 aa11.5□□□□□ -0.57
VCX3B-203ENST00000444481 CLLU1Q5K131 121 aa11.5□□□□□ -0.57
VCX3B-203ENST00000444481 STPG4Q8N801 248 aa11.5□□□□□ -0.57
VCX3B-203ENST00000444481 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
VCX3B-203ENST00000444481 A0A096LNI7 61 aa11.49□□□□□ -0.57
VCX3B-203ENST00000444481 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
VCX3B-203ENST00000444481 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
VCX3B-203ENST00000444481 C2orf48Q96LS8 159 aa11.48□□□□□ -0.57
VCX3B-203ENST00000444481 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
VCX3B-203ENST00000444481 Q6ZRU5 148 aa11.47□□□□□ -0.57
VCX3B-203ENST00000444481 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
VCX3B-203ENST00000444481 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
VCX3B-203ENST00000444481 FAT3Q8TDW7 4589 aa11.46□□□□□ -0.57
VCX3B-203ENST00000444481 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.57
VCX3B-203ENST00000444481 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms