RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SOCS3O14543 225 aa10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 RS1O15537 224 aa10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 CFC1BP0CG36 223 aa10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 CFC1P0CG37 223 aa10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 TEN1Q86WV5 123 aa10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 CITED1Q99966 193 aa10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-204ENST00000444061 KPRPQ5T749 579 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-204ENST00000444061 C20orf203Q8NBC4 194 aa10.32□□□□□ -0.76
SMARCA4-204ENST00000444061 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-204ENST00000444061 TRACP01848 142 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 FHL3Q13643 280 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 ANKRD29Q8N6D5 301 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 B5MCH6 92 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 CARD19Q96LW7 228 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
SMARCA4-204ENST00000444061 XIRP2A4UGR9 3374 aa10.3□□□□□ -0.76
SMARCA4-204ENST00000444061 TET2Q6N021 2002 aaPredicted RBP10.3□□□□□ -0.76
SMARCA4-204ENST00000444061 ATRQ13535 2644 aa10.3□□□□□ -0.76
SMARCA4-204ENST00000444061 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
SMARCA4-204ENST00000444061 CRYGDP07320 174 aa10.3□□□□□ -0.76
SMARCA4-204ENST00000444061 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
SMARCA4-204ENST00000444061 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
SMARCA4-204ENST00000444061 CRYBA4P53673 196 aa10.29□□□□□ -0.76
SMARCA4-204ENST00000444061 FOXI1Q12951 378 aa10.29□□□□□ -0.76
SMARCA4-204ENST00000444061 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
SMARCA4-204ENST00000444061 TMEM126AQ9H061 195 aa10.29□□□□□ -0.76
SMARCA4-204ENST00000444061 FXYD2P54710 66 aa10.28□□□□□ -0.76
SMARCA4-204ENST00000444061 U3KQK5 164 aa10.28□□□□□ -0.76
SMARCA4-204ENST00000444061 C9orf85Q96MD7 179 aa10.28□□□□□ -0.76
SMARCA4-204ENST00000444061 LAMTOR3Q9UHA4 124 aa10.28□□□□□ -0.76
SMARCA4-204ENST00000444061 WFDC2Q14508 124 aa10.28□□□□□ -0.76
SMARCA4-204ENST00000444061 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
SMARCA4-204ENST00000444061 UBE2BP63146 152 aa10.27□□□□□ -0.76
SMARCA4-204ENST00000444061 SS18L2Q9UHA2 77 aa10.27□□□□□ -0.76
SMARCA4-204ENST00000444061 BEAN1Q3B7T3 259 aa10.27□□□□□ -0.77
SMARCA4-204ENST00000444061 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
SMARCA4-204ENST00000444061 M0QY20 66 aa10.27□□□□□ -0.77
SMARCA4-204ENST00000444061 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-204ENST00000444061 RPL18AQ02543 176 aaKnown RBP10.27□□□□□ -0.77
SMARCA4-204ENST00000444061 Q9H8V8 135 aa10.27□□□□□ -0.77
SMARCA4-204ENST00000444061 PRSS47A8MTI9 375 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 NUPR2A6NF83 97 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 RBX1P62877 108 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 LINC00269Q8N2A0 174 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 UBL5Q9BZL1 73 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 CHD6Q8TD26 2715 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 LY6G6CO95867 125 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 NDUFA1O15239 70 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 REG3AQ06141 175 aa10.26□□□□□ -0.77
SMARCA4-204ENST00000444061 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
SMARCA4-204ENST00000444061 COL6A3P12111 3177 aa10.25□□□□□ -0.77
SMARCA4-204ENST00000444061 SPAG11BQ08648 103 aa10.25□□□□□ -0.77
SMARCA4-204ENST00000444061 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
SMARCA4-204ENST00000444061 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-204ENST00000444061 BAHCC1Q9P281 2608 aa10.24□□□□□ -0.77
SMARCA4-204ENST00000444061 PIK3CD-AS1Q5SR53 167 aa10.24□□□□□ -0.77
SMARCA4-204ENST00000444061 KRTAP1-1Q07627 177 aa10.24□□□□□ -0.77
SMARCA4-204ENST00000444061 Q6ZUT4 128 aa10.24□□□□□ -0.77
SMARCA4-204ENST00000444061 HERV-K104P63124 156 aa10.23□□□□□ -0.77
SMARCA4-204ENST00000444061 E9PLD3 99 aa10.23□□□□□ -0.77
SMARCA4-204ENST00000444061 H7C423 109 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 LOC100131303A0A0U1RQF7 123 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 ODF1Q14990 250 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 Q6ZTC4 211 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 SMIM20Q8N5G0 67 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
SMARCA4-204ENST00000444061 LINC01620Q4KN68 170 aa10.21□□□□□ -0.77
SMARCA4-204ENST00000444061 LELP1Q5T871 98 aa10.21□□□□□ -0.77
SMARCA4-204ENST00000444061 F8WEM9 126 aa10.21□□□□□ -0.78
SMARCA4-204ENST00000444061 M0R2N4 97 aa10.2□□□□□ -0.78
SMARCA4-204ENST00000444061 H3BT86 120 aa10.2□□□□□ -0.78
SMARCA4-204ENST00000444061 ATOX1O00244 68 aa10.2□□□□□ -0.78
SMARCA4-204ENST00000444061 CXCL5P42830 114 aa10.2□□□□□ -0.78
SMARCA4-204ENST00000444061 Q8N976 141 aa10.2□□□□□ -0.78
SMARCA4-204ENST00000444061 WFDC9Q8NEX5 89 aa10.2□□□□□ -0.78
SMARCA4-204ENST00000444061 TRBV6-5A0A0K0K1A5 114 aa10.19□□□□□ -0.78
SMARCA4-204ENST00000444061 TIRAPP58753 221 aa10.19□□□□□ -0.78
SMARCA4-204ENST00000444061 CHCHD10Q8WYQ3 142 aaPredicted RBP10.19□□□□□ -0.78
SMARCA4-204ENST00000444061 MAST4O15021 2626 aa10.19□□□□□ -0.78
SMARCA4-204ENST00000444061 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
SMARCA4-204ENST00000444061 IGHV4-4A0A075B6R2 117 aa10.18□□□□□ -0.78
SMARCA4-204ENST00000444061 J3KT08 172 aa10.18□□□□□ -0.78
SMARCA4-204ENST00000444061 RNF185Q96GF1 192 aa10.18□□□□□ -0.78
SMARCA4-204ENST00000444061 HIGD2BQ4VC39 106 aa10.18□□□□□ -0.78
SMARCA4-204ENST00000444061 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
SMARCA4-204ENST00000444061 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms