RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 LINC00474Q9P2X8 69 aa7.47□□□□□ -1.21
TTC28-203ENST00000442232 C7orf77A4D0Y5 90 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 PHOX2AO14813 284 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 PPP1R17O96001 155 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 TSHBP01222 138 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 RIGQ13278 110 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 STPG4Q8N801 248 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 PRSS3P2Q8NHM4 247 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 LYPD6BQ8NI32 183 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 OSTCQ9NRP0 149 aa7.46□□□□□ -1.22
TTC28-203ENST00000442232 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
TTC28-203ENST00000442232 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
TTC28-203ENST00000442232 ESDP10768 282 aa7.45□□□□□ -1.22
TTC28-203ENST00000442232 MALP21145 153 aa7.45□□□□□ -1.22
TTC28-203ENST00000442232 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
TTC28-203ENST00000442232 ISOC2Q96AB3 205 aa7.45□□□□□ -1.22
TTC28-203ENST00000442232 TRBV27A0A0K0K1C4 114 aa7.44□□□□□ -1.22
TTC28-203ENST00000442232 AMN1Q8IY45 258 aa7.44□□□□□ -1.22
TTC28-203ENST00000442232 ZNF664Q8N3J9 261 aa7.44□□□□□ -1.22
TTC28-203ENST00000442232 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
TTC28-203ENST00000442232 A0A096LNI7 61 aa7.43□□□□□ -1.22
TTC28-203ENST00000442232 VCYO14598 125 aa7.43□□□□□ -1.22
TTC28-203ENST00000442232 PPP1R2P9O14990 202 aa7.43□□□□□ -1.22
TTC28-203ENST00000442232 RAB4AP20338 218 aa7.43□□□□□ -1.22
TTC28-203ENST00000442232 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
TTC28-203ENST00000442232 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
TTC28-203ENST00000442232 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
TTC28-203ENST00000442232 C1orf196B1AJZ1 125 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 SMKR1H3BMG3 65 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 GAS8-AS1O95177 125 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
TTC28-203ENST00000442232 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
TTC28-203ENST00000442232 SYCNQ0VAF6 134 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 FAM74A3Q4VXF1 159 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 NAT8BQ9UHF3 227 aa7.42□□□□□ -1.22
TTC28-203ENST00000442232 HMCN2Q8NDA2 5059 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 COX7A2LO14548 114 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 CAMPP49913 170 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
TTC28-203ENST00000442232 ADIRFQ15847 76 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 TMEM241Q24JQ0 296 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 NUP35Q8NFH5 326 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 V9GYV3 84 aa7.41□□□□□ -1.22
TTC28-203ENST00000442232 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.22
TTC28-203ENST00000442232 LINC00526Q96FQ7 95 aa7.4□□□□□ -1.22
TTC28-203ENST00000442232 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 A0A1B0GW15 77 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 TCAPO15273 167 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 APOMO95445 188 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
TTC28-203ENST00000442232 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
TTC28-203ENST00000442232 IGLV4-69A0A075B6H9 119 aa7.38□□□□□ -1.23
TTC28-203ENST00000442232 S100A8P05109 93 aa7.38□□□□□ -1.23
TTC28-203ENST00000442232 CKS2P33552 79 aa7.38□□□□□ -1.23
TTC28-203ENST00000442232 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
TTC28-203ENST00000442232 GAGE2BQ13066 116 aa7.38□□□□□ -1.23
TTC28-203ENST00000442232 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
TTC28-203ENST00000442232 NRACQ8N912 160 aa7.38□□□□□ -1.23
TTC28-203ENST00000442232 UBE2D4Q9Y2X8 147 aa7.38□□□□□ -1.23
TTC28-203ENST00000442232 LINC00862A6NCI5 91 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 PTTG1IPP53801 180 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 MRPL51Q4U2R6 128 aaKnown RBP7.37□□□□□ -1.23
TTC28-203ENST00000442232 FAM104BQ5XKR9 115 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 Q6ZRP5 223 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 Q6ZUT4 128 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
TTC28-203ENST00000442232 F8W036 122 aa7.36□□□□□ -1.23
TTC28-203ENST00000442232 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
TTC28-203ENST00000442232 PEA15Q15121 130 aa7.36□□□□□ -1.23
TTC28-203ENST00000442232 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
TTC28-203ENST00000442232 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
TTC28-203ENST00000442232 SMIM27A0A1W2PRY6 76 aa7.35□□□□□ -1.23
TTC28-203ENST00000442232 HBBP68871 147 aa7.35□□□□□ -1.23
TTC28-203ENST00000442232 SPAG11BQ08648 103 aa7.35□□□□□ -1.23
TTC28-203ENST00000442232 C5orf38Q86SI9 138 aa7.35□□□□□ -1.23
TTC28-203ENST00000442232 LINC01600Q96MT4 127 aa7.35□□□□□ -1.23
TTC28-203ENST00000442232 RPL32P62910 135 aaKnown RBP7.34□□□□□ -1.23
TTC28-203ENST00000442232 OR10D4PQ8NGN7 298 aa7.34□□□□□ -1.23
TTC28-203ENST00000442232 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
TTC28-203ENST00000442232 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
TTC28-203ENST00000442232 D6R8Y8 96 aa7.33□□□□□ -1.24
TTC28-203ENST00000442232 TNFRSF6BO95407 300 aa7.33□□□□□ -1.24
TTC28-203ENST00000442232 MRPL54Q6P161 138 aaKnown RBP7.33□□□□□ -1.24
TTC28-203ENST00000442232 SMDT1Q9H4I9 107 aa7.33□□□□□ -1.24
TTC28-203ENST00000442232 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
TTC28-203ENST00000442232 A0A0J9YXV3 536 aa7.32□□□□□ -1.24
TTC28-203ENST00000442232 IFITM10A6NMD0 228 aa7.32□□□□□ -1.24
TTC28-203ENST00000442232 F8WDY8 70 aa7.32□□□□□ -1.24
TTC28-203ENST00000442232 PPBPP02775 128 aa7.32□□□□□ -1.24
TTC28-203ENST00000442232 MT-ND6P03923 174 aa7.32□□□□□ -1.24
TTC28-203ENST00000442232 RPL39P62891 51 aaKnown RBP7.32□□□□□ -1.24
TTC28-203ENST00000442232 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 239.6 ms