RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 GTF2H5Q6ZYL4 71 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 A8MTW9 85 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 GNRH2O43555 120 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 PRM2P04554 102 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 TSPEAR-AS2P59090 65 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 MRPL23Q16540 153 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 SPCS1Q9Y6A9 102 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 ICOSQ9Y6W8 199 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 TRBV6-5A0A0K0K1A5 114 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 UBE2D3P61077 147 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 UBE2D2P62837 147 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 PLEKHB2Q96CS7 222 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 EDA2RQ9HAV5 297 aa5.29□□□□□ -1.56
CDC42BPA-208ENST00000442054 CASC10Q5T4H9 136 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 LINC01600Q96MT4 127 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 DPH3P1Q9H4G8 78 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 TRBV27A0A0K0K1C4 114 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 K7ERU9 68 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 TNFRSF18Q9Y5U5 241 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 TGP01266 2768 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 NBEAL2Q6ZNJ1 2754 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 IGKV3OR2-268A0A0C4DH90 116 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 UBE2L6O14933 153 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 ORMDL2Q53FV1 153 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 C15orf53Q8NAA6 179 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 ZNRF2Q8NHG8 242 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 ODF3Q96PU9 254 aa5.28□□□□□ -1.56
CDC42BPA-208ENST00000442054 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 GAGE4Q13068 117 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 GAGE5Q13069 117 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 GAGE13Q4V321 117 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 Q6ZTI0 123 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 CRPP02741 224 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 PRSS1P07477 247 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 GYPEP15421 78 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 RPL36AP83881 106 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 WFDC2Q14508 124 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 RPL36ALQ969Q0 106 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 Q9HAA7 133 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 F8W1H4 67 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 GCSHP23434 173 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 RNF151Q2KHN1 245 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 AMTNQ6UX39 209 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 C2orf66Q6UXQ4 117 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 C14orf178Q8N769 122 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 JPT2Q9H910 190 aa5.27□□□□□ -1.57
CDC42BPA-208ENST00000442054 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 C11orf86A6NJI1 115 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 M0R2P5 195 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 FABP2P12104 132 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 CFAP126Q5VTH2 177 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 SUMO4Q6EEV6 95 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 NFE4Q86UQ8 179 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 IGHV3-30P01768 117 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 IGHV3-30-5P0DP03 117 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 ZFP2Q6ZN57 461 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 C1orf158Q8N1D5 194 aa5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 NHP2Q9NX24 153 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-208ENST00000442054 M0QY20 66 aa5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 TIMM17AQ99595 171 aa5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 A0A087WWL8 130 aa5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 RBMY1A1P0DJD3 496 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 RBMY1CP0DJD4 496 aa5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 RBMY1FQ15415 496 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 TTC32Q5I0X7 151 aa5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 LITAFQ99732 161 aa5.25□□□□□ -1.57
CDC42BPA-208ENST00000442054 RHOHQ15669 191 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 AP1S3Q96PC3 154 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 CDIP1Q9H305 208 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 CELA1Q9UNI1 258 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 A8MWV9 139 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 H3BMG7 143 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 RHODO00212 210 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 SCGB3A1Q96QR1 104 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 RPL39P62891 51 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 SLC25A29Q8N8R3 303 aa5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 C11orf68Q9H3H3 251 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-208ENST00000442054 MDFICQ9P1T7 246 aa5.23□□□□□ -1.57
CDC42BPA-208ENST00000442054 CFC1BP0CG36 223 aa5.23□□□□□ -1.57
CDC42BPA-208ENST00000442054 CFC1P0CG37 223 aa5.23□□□□□ -1.57
CDC42BPA-208ENST00000442054 CARD19Q96LW7 228 aa5.23□□□□□ -1.57
CDC42BPA-208ENST00000442054 VPS25Q9BRG1 176 aa5.23□□□□□ -1.57
CDC42BPA-208ENST00000442054 CRYBA4P53673 196 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 ATP6V0E2Q8NHE4 81 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 X6R8D5 127 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 M0QXV9 152 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 SH2D6Q7Z4S9 175 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 TMEM141Q96I45 108 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 IGHV3-33P01772 117 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 IGHV3-30-3P0DP02 117 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 Q8NAQ8 132 aa5.22□□□□□ -1.57
CDC42BPA-208ENST00000442054 PPP1R17O96001 155 aa5.21□□□□□ -1.57
CDC42BPA-208ENST00000442054 C1orf134Q5TEV5 83 aa5.21□□□□□ -1.57
CDC42BPA-208ENST00000442054 PMVKQ15126 192 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms