RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 LOC285095A0A1B0GVY8 99 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 E2F6O75461 281 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 MGPP08493 103 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 WHAMMP3Q1A5X7 153 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 C10orf128Q5T292 105 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 TAC4Q86UU9 113 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 TCTE3Q8IZS6 198 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 MMGT1Q8N4V1 131 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 MNS1Q8NEH6 495 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 LSM2Q9Y333 95 aaKnown RBP-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 LINC01558Q9Y6Z2 57 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 V9GYQ6 96 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 ACACAQ13085 2346 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 SLIT1O75093 1534 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 TMEM2Q9UHN6 1383 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 DNAH9Q9NYC9 4486 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 IFT140Q96RY7 1462 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 RIF1Q5UIP0 2472 aaKnown RBP-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 ADAMTS12P58397 1594 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 KNL1Q8NG31 2342 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 NBEAQ8NFP9 2946 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 SIPA1L3O60292 1781 aaPredicted RBP-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 LINC00959A0A1B0GUT2 108 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 I3L3M4 83 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 SNCGO76070 127 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 NDUFB6O95139 128 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 MT-ND4LP03901 98 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 IL5P05113 134 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 CMPK1P30085 196 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 UBE2D3P61077 147 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 UBE2D2P62837 147 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 TMEM244Q5VVB8 128 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 TRIQKQ629K1 86 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 PSMG3Q9BT73 122 aaPredicted RBP-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 CRIPTQ9P021 101 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 CEP290O15078 2479 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 PKD1L2Q7Z442 2459 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 MYH9P35579 1960 aaKnown RBP-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 ARHGEF10O15013 1369 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 DNHD1Q96M86 4753 aa-0.87□□□□□ -2.55
SUMO1P3-201ENST00000439961 DMXL1Q9Y485 3027 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 ANKRD50Q9ULJ7 1429 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 NINQ8N4C6 2090 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 TRAV13-2A0A0B4J235 113 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 A0A1B0GX51 115 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 CCL22O00626 93 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 HIST1H1DP16402 221 aaKnown RBP-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 RRAS2P62070 204 aaPredicted RBP-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 TMEM128Q5BJH2 165 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 SAMD13Q5VXD3 122 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 Q6ZUT4 128 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 AKAP14Q86UN6 197 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 TTC9CQ8N5M4 171 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 SKA2Q8WVK7 121 aaPredicted RBP-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 SPTSSAQ969W0 71 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 SEC11CQ9BY50 192 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 SPANXA1Q9NS26 97 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 CDKN2A-AS1Q9UH64 79 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 TRANK1O15050 2925 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 ERCC6Q03468 1493 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 KDM3BQ7LBC6 1761 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 PLXNA2O75051 1894 aa-0.88□□□□□ -2.55
SUMO1P3-201ENST00000439961 IFT172Q9UG01 1749 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 KIF13AQ9H1H9 1805 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 IGLC7A0M8Q6 106 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 HCG22E2RYF7 251 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 SFT2D2O95562 160 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 UBA52P62987 128 aaKnown RBP-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 HIST1H1AQ02539 215 aaPredicted RBP-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 C10orf113Q5VZT2 155 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 MIC13Q5XKP0 118 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 CHMP6Q96FZ7 201 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 FAM167A-AS1Q96KT0 104 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 MGST2Q99735 147 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 PRO1933Q9H354 126 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 DYNLRB1Q9NP97 96 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 CDC42SE2Q9NRR3 84 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 FAIMQ9NVQ4 179 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 COPZ2Q9P299 210 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 MAGI1Q96QZ7 1491 aaPredicted RBP-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 PLXNA1Q9UIW2 1896 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 CEP295Q9C0D2 2601 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 KIAA0556O60303 1618 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 CAMSAP1Q5T5Y3 1602 aa-0.89□□□□□ -2.55
SUMO1P3-201ENST00000439961 CUBNO60494 3623 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 UBR2Q8IWV8 1755 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 TRAV36DV7A0A075B6V5 113 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 TNFSF15O95150 251 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 DBIP07108 87 aaKnown RBP-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 DEFB1P60022 68 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 TFAMQ00059 246 aaKnown RBP-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 FDCSPQ8NFU4 85 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 SPRR4Q96PI1 79 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 PCBD2Q9H0N5 130 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 TPT1P8Q9HAU6 139 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 HIGD1BQ9P298 99 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 HIGD1AQ9Y241 93 aa-0.9□□□□□ -2.55
SUMO1P3-201ENST00000439961 NRXN2Q9P2S2 1712 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms