RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SONP18583 2426 aaKnown RBP7.42□□□□□ -1.22
CPNE1-218ENST00000439806 CELSR2Q9HCU4 2923 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
CPNE1-218ENST00000439806 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 CRLF1O75462 422 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 MUSTN1Q8IVN3 82 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 ZANQ9Y493 2812 aa7.42□□□□□ -1.22
CPNE1-218ENST00000439806 IGLV5-45A0A087WSX0 123 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 LOC100131303A0A0U1RQF7 123 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 A4D1N5 150 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 F8W1H4 67 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 H7C423 109 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 CFC1BP0CG36 223 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 CFC1P0CG37 223 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 ZFAND6Q6FIF0 208 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 VPS25Q9BRG1 176 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 CDKN2A-AS1Q9UH64 79 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 EPG5Q9HCE0 2579 aa7.41□□□□□ -1.22
CPNE1-218ENST00000439806 A0A0B4J2C4 111 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 H3BMG7 143 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 PSMB2P49721 201 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 FHL2Q14192 279 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 FAM19A3Q7Z5A8 133 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 KIR2DL5BQ8NHK3 375 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 SPANXDQ9BXN6 97 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 SPANXCQ9NY87 97 aa7.4□□□□□ -1.22
CPNE1-218ENST00000439806 FLNAP21333 2647 aaKnown RBP7.4□□□□□ -1.23
CPNE1-218ENST00000439806 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 SMIM9A6NGZ8 99 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 A8MZ25 164 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 NDUFA1O15239 70 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 TIMM17BO60830 172 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 SCGB1C2P0DMR2 95 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 COX6A2Q02221 97 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 C21orf62-AS1Q17RA5 79 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
CPNE1-218ENST00000439806 PDZD2O15018 2839 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 PRSS2P07478 247 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 DEFB130BP0DP73 79 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 DEFB130AP0DP74 79 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 GAGE6Q13070 117 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
CPNE1-218ENST00000439806 MIAQ16674 131 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 Q1RN00 199 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 LITAFQ99732 161 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 VPS13CQ709C8 3753 aa7.38□□□□□ -1.23
CPNE1-218ENST00000439806 G3V4G9 280 aa7.37□□□□□ -1.23
CPNE1-218ENST00000439806 IFITM1P13164 125 aa7.37□□□□□ -1.23
CPNE1-218ENST00000439806 WFDC2Q14508 124 aa7.37□□□□□ -1.23
CPNE1-218ENST00000439806 LINC00612Q8N6U2 182 aa7.37□□□□□ -1.23
CPNE1-218ENST00000439806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.37□□□□□ -1.23
CPNE1-218ENST00000439806 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
CPNE1-218ENST00000439806 X6R8D5 127 aa7.37□□□□□ -1.23
CPNE1-218ENST00000439806 KMT2BQ9UMN6 2715 aaPredicted RBP7.37□□□□□ -1.23
CPNE1-218ENST00000439806 SVEP1Q4LDE5 3571 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 TRBV20-1A0A075B6N2 111 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 H7C2G1 150 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 IGHV3-33P01772 117 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 SCGB1A1P11684 91 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 APOC4P55056 127 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 CCDC168Q8NDH2 2452 aa7.36□□□□□ -1.23
CPNE1-218ENST00000439806 MXRA5Q9NR99 2828 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 TEX48A0A1B0GUV7 120 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 SMIM1B2RUZ4 78 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 J3QR89 54 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 GYPEP15421 78 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 NPC2P61916 151 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 SPATA3Q8NHX4 192 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 Q9H8V8 135 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
CPNE1-218ENST00000439806 IGKV3OR2-268A0A0C4DH90 116 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 LYRM9A8MSI8 78 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 EIF4EBP3O60516 100 aaPredicted RBP7.34□□□□□ -1.23
CPNE1-218ENST00000439806 TCL1BO95988 128 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 COPS9Q8WXC6 57 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 CITED1Q99966 193 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 HIVEP2P31629 2446 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 MAP1AP78559 2803 aaPredicted RBP7.34□□□□□ -1.23
CPNE1-218ENST00000439806 MYO9AB2RTY4 2548 aa7.34□□□□□ -1.23
CPNE1-218ENST00000439806 F5H768 121 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 HERV-K104P63124 156 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 DEFB135Q30KP9 77 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 ETDBQ3ZM63 59 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 FAM222AQ5U5X8 452 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 PRIMA1Q86XR5 153 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
CPNE1-218ENST00000439806 ACANP16112 2415 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms