RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CDK2AP2O75956 126 aa11.85□□□□□ -0.51
CCDC188-201ENST00000439765 COA6Q5JTJ3 125 aaKnown RBP11.85□□□□□ -0.51
CCDC188-201ENST00000439765 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
CCDC188-201ENST00000439765 ABCA13Q86UQ4 5058 aa11.84□□□□□ -0.51
CCDC188-201ENST00000439765 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
CCDC188-201ENST00000439765 NUPR1O60356 82 aa11.84□□□□□ -0.51
CCDC188-201ENST00000439765 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
CCDC188-201ENST00000439765 C20orf203Q8NBC4 194 aa11.83□□□□□ -0.52
CCDC188-201ENST00000439765 KLK12Q9UKR0 248 aa11.83□□□□□ -0.52
CCDC188-201ENST00000439765 PSCAO43653 123 aa11.83□□□□□ -0.52
CCDC188-201ENST00000439765 G0S2P27469 103 aa11.83□□□□□ -0.52
CCDC188-201ENST00000439765 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
CCDC188-201ENST00000439765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
CCDC188-201ENST00000439765 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
CCDC188-201ENST00000439765 H7C423 109 aa11.82□□□□□ -0.52
CCDC188-201ENST00000439765 HSBP1O75506 76 aa11.82□□□□□ -0.52
CCDC188-201ENST00000439765 GAGE6Q13070 117 aa11.82□□□□□ -0.52
CCDC188-201ENST00000439765 Q8N976 141 aa11.82□□□□□ -0.52
CCDC188-201ENST00000439765 TMEM18Q96B42 140 aa11.82□□□□□ -0.52
CCDC188-201ENST00000439765 UBE2L6O14933 153 aa11.81□□□□□ -0.52
CCDC188-201ENST00000439765 C2orf66Q6UXQ4 117 aa11.81□□□□□ -0.52
CCDC188-201ENST00000439765 A0A096LNJ9 63 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 TRAV8-3A0A0A6YYJ7 113 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 S100A6P06703 90 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 RPL39P62891 51 aaKnown RBP11.8□□□□□ -0.52
CCDC188-201ENST00000439765 PMCHL1Q16048 86 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 CYSLTR1Q9Y271 337 aa11.8□□□□□ -0.52
CCDC188-201ENST00000439765 A0A087WTM6 91 aa11.79□□□□□ -0.52
CCDC188-201ENST00000439765 HBDP02042 147 aa11.79□□□□□ -0.52
CCDC188-201ENST00000439765 ANGP03950 147 aaKnown RBP11.79□□□□□ -0.52
CCDC188-201ENST00000439765 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
CCDC188-201ENST00000439765 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
CCDC188-201ENST00000439765 KRTAP4-5Q9BYR2 181 aa11.79□□□□□ -0.52
CCDC188-201ENST00000439765 APOBP04114 4563 aaKnown RBP11.78□□□□□ -0.52
CCDC188-201ENST00000439765 FUSP35637 526 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC188-201ENST00000439765 PKIAP61925 76 aa11.78□□□□□ -0.52
CCDC188-201ENST00000439765 DNAH5Q8TE73 4624 aa11.78□□□□□ -0.52
CCDC188-201ENST00000439765 LINC01549A6NIU2 74 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 EREGO14944 169 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 CRPP02741 224 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 FGF6P10767 208 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 RBX1P62877 108 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.52
CCDC188-201ENST00000439765 TMA7Q9Y2S6 64 aaKnown RBP11.77□□□□□ -0.52
CCDC188-201ENST00000439765 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.52
CCDC188-201ENST00000439765 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 TM2D2Q9BX73 214 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 A0A1B0GUV1 79 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 SNRPEP62304 92 aaKnown RBP11.76□□□□□ -0.53
CCDC188-201ENST00000439765 PDZD11Q5EBL8 140 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 PYGO1Q9Y3Y4 419 aa11.76□□□□□ -0.53
CCDC188-201ENST00000439765 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
CCDC188-201ENST00000439765 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
CCDC188-201ENST00000439765 SPANXA1Q9NS26 97 aa11.75□□□□□ -0.53
CCDC188-201ENST00000439765 CSDC2Q9Y534 153 aaKnown RBP11.75□□□□□ -0.53
CCDC188-201ENST00000439765 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 IGIPA6NJ69 53 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 DGAT2L7PQ6IED9 249 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 ERASQ7Z444 233 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 RMI2Q96E14 147 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
CCDC188-201ENST00000439765 IGLV4-60A0A075B6I1 120 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 LECT2O14960 151 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 HIST3H2BBQ8N257 126 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 LINC00269Q8N2A0 174 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 TIMM17AQ99595 171 aa11.73□□□□□ -0.53
CCDC188-201ENST00000439765 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
CCDC188-201ENST00000439765 WFDC2Q14508 124 aa11.72□□□□□ -0.53
CCDC188-201ENST00000439765 TMEM141Q96I45 108 aa11.72□□□□□ -0.53
CCDC188-201ENST00000439765 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
CCDC188-201ENST00000439765 NPSP0C0P6 89 aa11.71□□□□□ -0.53
CCDC188-201ENST00000439765 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.53
CCDC188-201ENST00000439765 FAM104AQ969W3 186 aa11.71□□□□□ -0.53
CCDC188-201ENST00000439765 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.53
CCDC188-201ENST00000439765 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.53
CCDC188-201ENST00000439765 COX11Q9Y6N1 276 aa11.71□□□□□ -0.53
CCDC188-201ENST00000439765 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 ATP5LO75964 103 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 FABP4P15090 132 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 Q8N1X5 172 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
CCDC188-201ENST00000439765 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.7□□□□□ -0.54
CCDC188-201ENST00000439765 MIAQ16674 131 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 Q6ZUT4 128 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 LINC00173Q6ZV60 143 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 Q8N814 137 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 BAALCQ8WXS3 180 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 PRR34Q9NV39 138 aa11.7□□□□□ -0.54
CCDC188-201ENST00000439765 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms