RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 C2orf48Q96LS8 159 aa13.16□□□□□ -0.3
KCNC4-204ENST00000438661 UBE2D4Q9Y2X8 147 aa13.16□□□□□ -0.3
KCNC4-204ENST00000438661 TRACP01848 142 aa13.15□□□□□ -0.3
KCNC4-204ENST00000438661 Q6ZSN1 163 aa13.15□□□□□ -0.3
KCNC4-204ENST00000438661 PIK3CD-AS1Q5SR53 167 aa13.15□□□□□ -0.3
KCNC4-204ENST00000438661 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
KCNC4-204ENST00000438661 C19orf54Q5BKX5 351 aa13.14□□□□□ -0.31
KCNC4-204ENST00000438661 DSCR8Q96T75 97 aa13.14□□□□□ -0.31
KCNC4-204ENST00000438661 NDUFA1O15239 70 aa13.13□□□□□ -0.31
KCNC4-204ENST00000438661 CHCHD7Q9BUK0 85 aa13.13□□□□□ -0.31
KCNC4-204ENST00000438661 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
KCNC4-204ENST00000438661 PRIMA1Q86XR5 153 aa13.13□□□□□ -0.31
KCNC4-204ENST00000438661 C14orf132Q9NPU4 83 aa13.13□□□□□ -0.31
KCNC4-204ENST00000438661 OR13C6PQ8NH95 151 aa13.12□□□□□ -0.31
KCNC4-204ENST00000438661 DNAL4O96015 105 aa13.12□□□□□ -0.31
KCNC4-204ENST00000438661 ATP5G1P05496 136 aa13.12□□□□□ -0.31
KCNC4-204ENST00000438661 SNRPD3P62318 126 aaKnown RBP13.12□□□□□ -0.31
KCNC4-204ENST00000438661 ATOX1O00244 68 aa13.11□□□□□ -0.31
KCNC4-204ENST00000438661 ABCA2Q9BZC7 2435 aa13.11□□□□□ -0.31
KCNC4-204ENST00000438661 TIMM17BO60830 172 aa13.11□□□□□ -0.31
KCNC4-204ENST00000438661 CRYGAP11844 174 aa13.11□□□□□ -0.31
KCNC4-204ENST00000438661 C9orf129Q5T035 196 aaKnown RBP13.11□□□□□ -0.31
KCNC4-204ENST00000438661 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
KCNC4-204ENST00000438661 CXCL5P42830 114 aa13.11□□□□□ -0.31
KCNC4-204ENST00000438661 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
KCNC4-204ENST00000438661 BEAN1Q3B7T3 259 aa13.1□□□□□ -0.31
KCNC4-204ENST00000438661 MALP21145 153 aa13.1□□□□□ -0.31
KCNC4-204ENST00000438661 RNF152Q8N8N0 203 aa13.09□□□□□ -0.31
KCNC4-204ENST00000438661 H3BUX3 64 aa13.08□□□□□ -0.31
KCNC4-204ENST00000438661 RBMY1A1P0DJD3 496 aaKnown RBP13.08□□□□□ -0.32
KCNC4-204ENST00000438661 RBMY1CP0DJD4 496 aa13.08□□□□□ -0.32
KCNC4-204ENST00000438661 RBMY1FQ15415 496 aaKnown RBP13.08□□□□□ -0.32
KCNC4-204ENST00000438661 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
KCNC4-204ENST00000438661 C19orf84I3L1E1 186 aa13.08□□□□□ -0.32
KCNC4-204ENST00000438661 IGHV4-38-2P0DP08 117 aa13.08□□□□□ -0.32
KCNC4-204ENST00000438661 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
KCNC4-204ENST00000438661 C4orf26Q17RF5 130 aa13.07□□□□□ -0.32
KCNC4-204ENST00000438661 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
KCNC4-204ENST00000438661 DPH3Q96FX2 82 aa13.06□□□□□ -0.32
KCNC4-204ENST00000438661 C10orf99Q6UWK7 81 aa13.06□□□□□ -0.32
KCNC4-204ENST00000438661 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
KCNC4-204ENST00000438661 SPTBN4Q9H254 2564 aa13.05□□□□□ -0.32
KCNC4-204ENST00000438661 HIST1H4AP62805 103 aaKnown RBP13.05□□□□□ -0.32
KCNC4-204ENST00000438661 LINC00846Q9NV44 126 aa13.05□□□□□ -0.32
KCNC4-204ENST00000438661 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
KCNC4-204ENST00000438661 HRCT1Q6UXD1 115 aa13.04□□□□□ -0.32
KCNC4-204ENST00000438661 CELSR2Q9HCU4 2923 aa13.04□□□□□ -0.32
KCNC4-204ENST00000438661 A0A087WYN8 130 aa13.04□□□□□ -0.32
KCNC4-204ENST00000438661 IGHV4-61A0A0C4DH41 118 aa13.04□□□□□ -0.32
KCNC4-204ENST00000438661 OXTP01178 125 aa13.03□□□□□ -0.32
KCNC4-204ENST00000438661 UCNP55089 124 aa13.03□□□□□ -0.32
KCNC4-204ENST00000438661 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
KCNC4-204ENST00000438661 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
KCNC4-204ENST00000438661 PIMREGQ9BSJ6 248 aa13.02□□□□□ -0.33
KCNC4-204ENST00000438661 NCR3O14931 201 aa13.02□□□□□ -0.33
KCNC4-204ENST00000438661 SLPIP03973 132 aa13.02□□□□□ -0.33
KCNC4-204ENST00000438661 RPS28P62857 69 aaKnown RBP13.02□□□□□ -0.33
KCNC4-204ENST00000438661 CRPP02741 224 aa13.01□□□□□ -0.33
KCNC4-204ENST00000438661 SERP2Q8N6R1 65 aa13.01□□□□□ -0.33
KCNC4-204ENST00000438661 SMIM1B2RUZ4 78 aa13.01□□□□□ -0.33
KCNC4-204ENST00000438661 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
KCNC4-204ENST00000438661 WFDC9Q8NEX5 89 aa13□□□□□ -0.33
KCNC4-204ENST00000438661 USP17L23D6RBM5 183 aa13□□□□□ -0.33
KCNC4-204ENST00000438661 K7EQG2 157 aa13□□□□□ -0.33
KCNC4-204ENST00000438661 CFHR3Q02985 330 aa13□□□□□ -0.33
KCNC4-204ENST00000438661 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 ITPR1Q14643 2758 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 IGKV3OR2-268A0A0C4DH90 116 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 FAM222AQ5U5X8 452 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 LINC01561Q8N1V8 128 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 LINC00337Q8N6G1 96 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 A6NDX4 124 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 C10orf105Q8TEF2 133 aa12.99□□□□□ -0.33
KCNC4-204ENST00000438661 IGLV5-39A0A0G2JS06 123 aa12.98□□□□□ -0.33
KCNC4-204ENST00000438661 K7EMT4 169 aa12.98□□□□□ -0.33
KCNC4-204ENST00000438661 TMEM258P61165 79 aa12.98□□□□□ -0.33
KCNC4-204ENST00000438661 HILS1P60008 231 aa12.97□□□□□ -0.33
KCNC4-204ENST00000438661 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
KCNC4-204ENST00000438661 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
KCNC4-204ENST00000438661 LECT2O14960 151 aa12.97□□□□□ -0.33
KCNC4-204ENST00000438661 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
KCNC4-204ENST00000438661 H3BUA1 57 aa12.96□□□□□ -0.33
KCNC4-204ENST00000438661 IGLV1-40P01703 118 aa12.96□□□□□ -0.33
KCNC4-204ENST00000438661 DEFB131AP59861 70 aa12.96□□□□□ -0.33
KCNC4-204ENST00000438661 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.33
KCNC4-204ENST00000438661 SND1-IT1Q9HBX3 110 aa12.96□□□□□ -0.33
KCNC4-204ENST00000438661 TRAV13-2A0A0B4J235 113 aa12.95□□□□□ -0.34
KCNC4-204ENST00000438661 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
KCNC4-204ENST00000438661 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
KCNC4-204ENST00000438661 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
KCNC4-204ENST00000438661 LINC00158P58513 81 aa12.94□□□□□ -0.34
KCNC4-204ENST00000438661 UPK3BQ9BT76 320 aa12.94□□□□□ -0.34
KCNC4-204ENST00000438661 GNLYP22749 145 aa12.94□□□□□ -0.34
KCNC4-204ENST00000438661 TRAV23DV6A0A075B6W5 121 aa12.93□□□□□ -0.34
KCNC4-204ENST00000438661 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
KCNC4-204ENST00000438661 IGKV2-28A0A075B6P5 120 aa12.93□□□□□ -0.34
KCNC4-204ENST00000438661 F5H768 121 aa12.93□□□□□ -0.34
KCNC4-204ENST00000438661 AVPP01185 164 aa12.93□□□□□ -0.34
KCNC4-204ENST00000438661 IGKV2D-28P01615 120 aa12.93□□□□□ -0.34
KCNC4-204ENST00000438661 RPL36AP83881 106 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms